RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ATF6P18850 670 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 EPHA3P29320 983 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 CD151P48509 253 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 SIRPB2Q5JXA9 342 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 TSTD2Q5T7W7 516 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 KIAA0930Q6ICG6 404 aaPredicted RBP16.78■□□□□ 0.28
TVP23B-202ENST00000476139 SH3RF2Q8TEC5 729 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 HEXDCQ8WVB3 486 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 SCLYQ96I15 445 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.78■□□□□ 0.28
TVP23B-202ENST00000476139 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
TVP23B-202ENST00000476139 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 LRFN2Q9ULH4 789 aa16.78■□□□□ 0.28
TVP23B-202ENST00000476139 A6NHS1 94 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 ENO4A6NNW6 628 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 MAP3K7O43318 606 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 JUNP05412 331 aaKnown RBP16.77■□□□□ 0.28
TVP23B-202ENST00000476139 ATP5BP06576 529 aaKnown RBP16.77■□□□□ 0.28
TVP23B-202ENST00000476139 TFEBP19484 476 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 TBCCQ15814 346 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 OR52K2Q8NGK3 314 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 DRC3Q9H069 523 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 MRM3Q9HC36 420 aaKnown RBP16.77■□□□□ 0.28
TVP23B-202ENST00000476139 CORO1CQ9ULV4 474 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-202ENST00000476139 HEATR9A2RTY3 570 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 DRGXA6NNA5 263 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 TMEM114B3SHH9 223 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 TBC1D4O60343 1298 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 RTN3O95197 1032 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-202ENST00000476139 IGLV3-27P01718 113 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 PIRTP0C851 137 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 UBTFL6P0CB48 400 aaPredicted RBP16.77■□□□□ 0.28
TVP23B-202ENST00000476139 SERINC3Q13530 473 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 CSHL1Q14406 222 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 LSMEM2Q8N112 164 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 CCNYL1Q8N7R7 359 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 OR6P1Q8NGX9 317 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 HDAC10Q969S8 669 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 NUF2Q9BZD4 464 aa16.77■□□□□ 0.28
TVP23B-202ENST00000476139 DOCK4Q8N1I0 1966 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 TBKBP1A7MCY6 615 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 MATN2O00339 956 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 CCNHP51946 323 aaPredicted RBP16.77■□□□□ 0.27
TVP23B-202ENST00000476139 TCHHL1Q5QJ38 904 aaPredicted RBP16.77■□□□□ 0.27
TVP23B-202ENST00000476139 C6orf163Q5TEZ5 329 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 TMC7Q7Z402 723 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 TEX26Q8N6G2 289 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 PXYLP1Q8TE99 480 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 SREK1Q8WXA9 508 aaKnown RBP16.77■□□□□ 0.27
TVP23B-202ENST00000476139 PPP1R2P1Q96PQ5 205 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 SEMA3CQ99985 751 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 FNIP2Q9P278 1114 aa16.77■□□□□ 0.27
TVP23B-202ENST00000476139 SLC6A4P31645 630 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 RPL14P50914 215 aaKnown RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 ACTR3P61158 418 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 LBRQ14739 615 aaKnown RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 FRMD7Q6ZUT3 714 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 RPS27LQ71UM5 84 aaKnown RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 NET1Q7Z628 596 aaPredicted RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 SPPL2BQ8TCT7 592 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 FAM136AQ96C01 138 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 PRKD2Q9BZL6 878 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 C1orf21Q9H246 121 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 TMEM233B4DJY2 109 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 APOA4P06727 396 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 COPAP53621 1224 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 DEFB115Q30KQ5 88 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 DNAL1Q4LDG9 190 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 FAM219BQ5XKK7 198 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 IZUMO2Q6UXV1 221 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 LGI2Q8N0V4 545 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 SLC26A7Q8TE54 656 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 ANKRD27Q96NW4 1050 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 ELAC1Q9H777 363 aaKnown RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 VPS45Q9NRW7 570 aa16.76■□□□□ 0.27
TVP23B-202ENST00000476139 OLA1Q9NTK5 396 aaKnown RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 MARCH4Q9P2E8 410 aaPredicted RBP16.76■□□□□ 0.27
TVP23B-202ENST00000476139 ATXN1LP0C7T5 689 aaKnown RBP16.75■□□□□ 0.27
TVP23B-202ENST00000476139 KCNA5P22460 613 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 SERPINB5P36952 375 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 SLC12A2P55011 1212 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 CUL3Q13618 768 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 CRIPAKQ8N1N5 446 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 TCF7L2Q9NQB0 619 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 CRYL1Q9Y2S2 319 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 RAP2CQ9Y3L5 183 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 ARL5AQ9Y689 179 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 SLC38A8A6NNN8 435 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 GRID2O43424 1007 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 GJB5O95377 273 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 ZCCHC18P0CG32 403 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 COL6A1P12109 1028 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 COL6A2P12110 1019 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 CRABP2P29373 138 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 PSEN1P49768 467 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 GALNT3Q14435 633 aa16.75■□□□□ 0.27
TVP23B-202ENST00000476139 RNF220Q5VTB9 566 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms