RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 LONRF1Q17RB8 773 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 POM121L1PQ3SYA9 428 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 NAPEPLDQ6IQ20 393 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 C22orf39Q6P5X5 142 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 TRMT10BQ6PF06 316 aaKnown RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 UNC5AQ6ZN44 842 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 TRMT10CQ7L0Y3 403 aaKnown RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 CNPY4Q8N129 248 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 EPS8L3Q8TE67 593 aaKnown RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 EBNA1BP2Q99848 306 aaKnown RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 FOXP3Q9BZS1 431 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 HEBP1Q9NRV9 189 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 HECAQ9UBI9 543 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 KCTD3Q9Y597 815 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 ANKRD36A6QL64 1941 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 TICRRQ7Z2Z1 1910 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 CCL22O00626 93 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 ZNF189O75820 626 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 KIAA0754O94854 1291 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 GALK1P51570 392 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 CDH17Q12864 832 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 NR1H3Q13133 447 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 PTCRAQ6ISU1 281 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 RELL1Q8IUW5 271 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 PNPLA1Q8N8W4 532 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 MFSD3Q96ES6 412 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 IFT43Q96FT9 208 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 PHF7Q9BWX1 381 aaPredicted RBP18.25■□□□□ 0.51
ATG4B-217ENST00000475693 SLC27A6Q9Y2P4 619 aa18.25■□□□□ 0.51
ATG4B-217ENST00000475693 MYLKQ15746 1914 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 LOC285095A0A1B0GVY8 99 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 TLDC2A0PJX2 215 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 ERI2A8K979 691 aaKnown RBP18.24■□□□□ 0.51
ATG4B-217ENST00000475693 GOLGA8TH3BQL2 631 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 NDC80O14777 642 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 AURKAO14965 403 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 WASP42768 502 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 LIG3P49916 1009 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 ZNF844Q08AG5 666 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 LRRC73Q5JTD7 316 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 CEP85LQ5SZL2 805 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 TERB1Q8NA31 727 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 GRIN3AQ8TCU5 1115 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 FBF1Q8TES7 1133 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 EZH1Q92800 747 aaPredicted RBP18.24■□□□□ 0.51
ATG4B-217ENST00000475693 STAMBPL1Q96FJ0 436 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 TRIB3Q96RU7 358 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 CTNNAL1Q9UBT7 734 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 SLC2A6Q9UGQ3 507 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 PCDHB9Q9Y5E1 797 aa18.24■□□□□ 0.51
ATG4B-217ENST00000475693 A8MX80 341 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 DLDP09622 509 aaKnown RBP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 CD72P21854 359 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 KCNA4P22459 653 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 NMBRP28336 390 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 MDH1P40925 334 aaKnown RBP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 SEC13P55735 322 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 NSUN2Q08J23 767 aaKnown RBP eCLIP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 MSLNQ13421 630 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 SEPT6Q14141 434 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 ZSWIM9Q86XI8 627 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 KIAA1958Q8N8K9 716 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 LPCAT1Q8NF37 534 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 OR2AP1Q8NGE2 309 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 FRS2Q8WU20 508 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 TDRD1Q9BXT4 1180 aaKnown RBP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 CENPHQ9H3R5 247 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 ZDHHC6Q9H6R6 413 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 VPS45Q9NRW7 570 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 BFARQ9NZS9 450 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 GOLGA6L10A6NI86 522 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 KAT7O95251 611 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 SLC4A1P02730 911 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 MLNP12872 115 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 CTPS1P17812 591 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 CCNHP51946 323 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 SMAD2Q15796 467 aaKnown RBP18.23■□□□□ 0.51
ATG4B-217ENST00000475693 OR2A12Q8NGT7 310 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 RMDN1Q96DB5 314 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 TMBIM4Q9HC24 238 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 SMYD2Q9NRG4 433 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 SPO11Q9Y5K1 396 aa18.23■□□□□ 0.51
ATG4B-217ENST00000475693 TCRBV9S1A1TA0A576 114 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 GOLGA8CPA6NN73 597 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 CXorf49A8MYA2 514 aaPredicted RBP18.22■□□□□ 0.51
ATG4B-217ENST00000475693 FAM107AO95990 144 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 IFFO1Q0D2I5 559 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 DMC1Q14565 340 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 MYLK3Q32MK0 819 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 LINC00523Q86TU6 105 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 BLOC1S5Q8TDH9 187 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 PTPRN2Q92932 1015 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 PLA2G4CQ9UP65 541 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 USP34Q70CQ2 3546 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 POC1B-GALNT4F8VUJ3 575 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 PSMD3O43242 534 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 UGT1A9O60656 530 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 ALPIP09923 528 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 METAP1P53582 386 aa18.22■□□□□ 0.51
ATG4B-217ENST00000475693 SULT2A1Q06520 285 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms