RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 GPATCH2LQ9NWQ4 482 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 UTP11Q9Y3A2 253 aaKnown RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 TRPM6Q9BX84 2022 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 SPAARA0A1B0GVQ0 90 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 TCRBV7S2A1N4TA0A589 114 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 RNF103O00237 685 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 EEF2KO00418 725 aaKnown RBP15.85■□□□□ 0.13
CPSF3-203ENST00000475482 PLK4O00444 970 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 DAPK3O43293 454 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 ERLIN1O75477 346 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 ECEL1O95672 775 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 WNT1P04628 370 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 CD48P09326 243 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 ETFBP38117 255 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 NR2C2P49116 596 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 PPP2CBP62714 309 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 PPP2CAP67775 309 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 LLGL1Q15334 1064 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 PIP5KL1Q5T9C9 394 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 LAYNQ6UX15 382 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 LINGO4Q6UY18 593 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 TRIM69Q86WT6 500 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 NAXDQ8IW45 347 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 PLPP6Q8IY26 295 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 C1orf54Q8WWF1 131 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 TSC1Q92574 1164 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 P3H4Q92791 437 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 ARHGEF2Q92974 986 aaKnown RBP15.85■□□□□ 0.13
CPSF3-203ENST00000475482 VOPP1Q96AW1 172 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 SLC6A18Q96N87 628 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 CAMK1GQ96NX5 476 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 KCTD15Q96SI1 283 aaPredicted RBP15.85■□□□□ 0.13
CPSF3-203ENST00000475482 ATP13A1Q9HD20 1204 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 DONSONQ9NYP3 566 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 AMACRQ9UHK6 382 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 PCOLCE2Q9UKZ9 415 aa15.85■□□□□ 0.13
CPSF3-203ENST00000475482 DRG1Q9Y295 367 aaKnown RBP15.85■□□□□ 0.13
CPSF3-203ENST00000475482 FRYQ5TBA9 3013 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 CBX4O00257 560 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 WNT9AO14904 365 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 RAD51CO43502 376 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 PCDHGA12O60330 932 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 HEXIM1O94992 359 aaKnown RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 NUDT1P36639 197 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 ACVRL1P37023 503 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 TPI1P60174 286 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 DYNLT1P63172 113 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 SIM1P81133 766 aaPredicted RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 BRD3Q15059 726 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 TRIP6Q15654 476 aaKnown RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 CA9Q16790 459 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 SLC9A4Q6AI14 798 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 DPY19L3Q6ZPD9 716 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 PCDH20Q8N6Y1 951 aaKnown RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 CHST14Q8NCH0 376 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 CCHCR1Q8TD31 782 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 ISG20Q96AZ6 181 aaKnown RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 HAUS1Q96CS2 278 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 TBC1D31Q96DN5 1066 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 CCDC114Q96M63 670 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 CSPG4P5Q96PW8 444 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 SPON2Q9BUD6 331 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 TMEM121BQ9BXQ6 578 aaPredicted RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 PARD6BQ9BYG5 372 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 MAGEH1Q9H213 219 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 NOL6Q9H6R4 1146 aaKnown RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 ANKZF1Q9H8Y5 726 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 FARP1Q9Y4F1 1045 aaPredicted RBP15.84■□□□□ 0.13
CPSF3-203ENST00000475482 WASF2Q9Y6W5 498 aa15.84■□□□□ 0.13
CPSF3-203ENST00000475482 TBC1D3DA0A087WVF3 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3IA0A087WXS9 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3EA0A087X179 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3KA0A087X1G2 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 FAM221BA6H8Z2 402 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3FA6NER0 549 aaPredicted RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 WASH4PA8MWX3 477 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3LB9A6J9 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 H0Y8X5 98 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 NDC80O14777 642 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 LIASO43766 372 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 CREB3O43889 395 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 DFNA5O60443 496 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TOP3BO95985 862 aaKnown RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 PRNPP04156 253 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3HP0C7X1 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 CD38P28907 300 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 MMRN1Q13201 1228 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 NAA30Q147X3 362 aaPredicted RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 PPP1R7Q15435 360 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3GQ6DHY5 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3CQ6IPX1 549 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 RWDD4Q6NW29 188 aaKnown RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 NEK5Q6P3R8 708 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 GSTA5Q7RTV2 222 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 TBC1D3Q8IZP1 549 aaPredicted RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 PYROXD2Q8N2H3 581 aa15.83■□□□□ 0.12
CPSF3-203ENST00000475482 RTL3Q8N8U3 475 aaKnown RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 EIF1ADQ8N9N8 165 aaKnown RBP15.83■□□□□ 0.12
CPSF3-203ENST00000475482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms