RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 EP400NLQ6ZTU2 488 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 ADIPOR2Q86V24 386 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 YAF2Q8IY57 180 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 CPA6Q8N4T0 437 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 PCDH20Q8N6Y1 951 aaKnown RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 LPCAT1Q8NF37 534 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 OR2AP1Q8NGE2 309 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 MZB1Q8WU39 189 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 RMDN1Q96DB5 314 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 RPL10LQ96L21 214 aaKnown RBP13.84□□□□□ -0.19
TRAF4-210ENST00000475329 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 ZNF778Q96MU6 729 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 MYADMQ96S97 322 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 SMC6Q96SB8 1091 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 CPNE1Q99829 537 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 EBF3Q9H4W6 596 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 UGT1A7Q9HAW7 530 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 UGT1A10Q9HAW8 530 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 UGT1A8Q9HAW9 530 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 TREX1Q9NSU2 369 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 TXNDC16Q9P2K2 825 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 PCDHGC4Q9Y5F7 938 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 MTCH2Q9Y6C9 303 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 TICRRQ7Z2Z1 1910 aa13.84□□□□□ -0.19
TRAF4-210ENST00000475329 MROH6A6NGR9 719 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 A6NNZ2 444 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 TRIM49D1C9J1S8 452 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 FAM155BO75949 473 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 MT-ND3P03897 115 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 ASLP04424 464 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 GP5P40197 560 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 DLX2Q07687 328 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-210ENST00000475329 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
TRAF4-210ENST00000475329 TUBB8Q3ZCM7 444 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 HSP90AA5PQ58FG0 334 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 DGKKQ5KSL6 1271 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
TRAF4-210ENST00000475329 MFSD6LQ8IWD5 586 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 BLOC1S5Q8TDH9 187 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 PEX13Q92968 403 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 MYO19Q96H55 970 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 ZFYVE19Q96K21 471 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 FAM83CQ9BQN1 747 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 FAM167BQ9BTA0 163 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 CAPS2Q9BXY5 557 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 TNKS2Q9H2K2 1166 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 ATP13A3Q9H7F0 1226 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 SSU72Q9NP77 194 aaKnown RBP13.83□□□□□ -0.2
TRAF4-210ENST00000475329 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRAF4-210ENST00000475329 IL1RAPL1Q9NZN1 696 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 SLC17A6Q9P2U8 582 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 SLC2A6Q9UGQ3 507 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-210ENST00000475329 RIMKLBQ9ULI2 386 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 ERVW-1Q9UQF0 538 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 SLC27A6Q9Y2P4 619 aa13.83□□□□□ -0.2
TRAF4-210ENST00000475329 A0A1W2PPM1 405 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 LDB2O43679 373 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 SOCS5O75159 536 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 TULP3O75386 442 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 VAPBO95292 243 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 CRTAMO95727 393 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 PRLP01236 227 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 POU3F3P20264 500 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 MDH1P40925 334 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 GRIA4P48058 902 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 CSE1LP55060 971 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 RPL26P61254 145 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 BCL2L1Q07817 233 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 FCHO2Q0JRZ9 810 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 THOC5Q13769 683 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 COL19A1Q14993 1142 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 GEN1Q17RS7 908 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ACCSLQ4AC99 568 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ARMC12Q5T9G4 340 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 TEDDM1Q5T9Z0 273 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 GRTP1Q5TC63 336 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ETFBKMTQ8IXQ9 262 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 RYBPQ8N488 228 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 GABPB2Q8TAK5 448 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 BRSK1Q8TDC3 778 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 PDCD6IPQ8WUM4 868 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ELSPBP1Q96BH3 223 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ALKBH8Q96BT7 664 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 TUBGCP5Q96RT8 1024 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 KXD1Q9BQD3 176 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 TTYH1Q9H313 450 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 ECT2Q9H8V3 914 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 KCNK9Q9NPC2 374 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 HPS4Q9NQG7 708 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 IARS2Q9NSE4 1012 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 PSD3Q9NYI0 1048 aa13.82□□□□□ -0.2
TRAF4-210ENST00000475329 RPL26L1Q9UNX3 145 aaKnown RBP13.82□□□□□ -0.2
TRAF4-210ENST00000475329 SMG5Q9UPR3 1016 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms