RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 TRAFD1O14545 582 aaPredicted RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 KHNYNO15037 678 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 BCAT2O15382 392 aaPredicted RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 HTRA2O43464 458 aaPredicted RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 RNGTTO60942 597 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 SOCS5O75159 536 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 GJB3O75712 270 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 PCDH8O95206 1070 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 PIGNO95427 931 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 SERPINF2P08697 491 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 XPAP23025 273 aaPredicted RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 MAXP61244 160 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 RPS21P63220 83 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 ITKQ08881 620 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 NOMO1Q15155 1222 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 TEX44Q53QW1 395 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 CFAP58Q5T655 872 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 KIAA1161Q6NSJ0 714 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 SLC23A3Q6PIS1 610 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 ZC3H18Q86VM9 953 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 HORMAD1Q86X24 394 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 REXO1L1PQ8IX06 675 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 CNTD1Q8N815 330 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 TTC13Q8NBP0 860 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 ACTL9Q8TC94 416 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 SNX19Q92543 992 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 NSMCE3Q96MG7 304 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 VAT1Q99536 393 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 SEMA3CQ99985 751 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 FERMT1Q9BQL6 677 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 ORAI3Q9BRQ5 295 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 HERPUD2Q9BSE4 406 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 MIR1-1HGQ9H1L0 117 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 CARD9Q9H257 536 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 RALYQ9UKM9 306 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 SLC6A14Q9UN76 642 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 DMTF1Q9Y222 760 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 MAP1BP46821 2468 aaKnown RBP8.1□□□□□ -1.11
HPS1-210ENST00000474873 RALGAPA1Q6GYQ0 2036 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 SHROOM3Q8TF72 1996 aa8.1□□□□□ -1.11
HPS1-210ENST00000474873 A0A1W2PQU0 124 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 NEMP1O14524 444 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ZNF189O75820 626 aaPredicted RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 HLA-DQB2P05538 268 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 NFKBIAP25963 317 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ABL2P42684 1182 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 AFF3P51826 1226 aaKnown RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 PPP2CBP62714 309 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 PPP2CAP67775 309 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 IRX4P78413 519 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 OTUD4Q01804 1114 aaKnown RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 LMNB2Q03252 620 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ELP6Q0PNE2 266 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 WASHC5Q12768 1159 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ZBTB17Q13105 803 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 KLF1Q13351 362 aaPredicted RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 CCDC6Q16204 474 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ZNF284Q2VY69 593 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TMEM259Q4ZIN3 620 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 SETMARQ53H47 684 aaPredicted RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 SLC45A4Q5BKX6 768 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TRIM61Q5EBN2 209 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 AADACL2Q6P093 401 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ERAP2Q6P179 960 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 PRR23CQ6ZRP0 262 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ZSWIM9Q86XI8 627 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ARRDC2Q8TBH0 407 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 HTR3CQ8WXA8 447 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 ASB12Q8WXK4 309 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 HAUS1Q96CS2 278 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TEKT5Q96M29 485 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 QKIQ96PU8 341 aaKnown RBP eCLIP8.09□□□□□ -1.11
HPS1-210ENST00000474873 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TLR10Q9BXR5 811 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 NUSAP1Q9BXS6 441 aaKnown RBP8.09□□□□□ -1.11
HPS1-210ENST00000474873 SLC25A51Q9H1U9 297 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 EBF2Q9HAK2 575 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 CAPN10Q9HC96 672 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 PCDH12Q9NPG4 1184 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 SEPT10Q9P0V9 454 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TRHDEQ9UKU6 1024 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 JRKLQ9Y4A0 524 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 TTLL3Q9Y4R7 772 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 PCDHGC4Q9Y5F7 938 aa8.09□□□□□ -1.11
HPS1-210ENST00000474873 DNAH14Q0VDD8 3507 aa8.08□□□□□ -1.12
HPS1-210ENST00000474873 TNRC6BQ9UPQ9 1833 aaKnown RBP8.08□□□□□ -1.12
HPS1-210ENST00000474873 ATXN2Q99700 1313 aaKnown RBP8.08□□□□□ -1.12
HPS1-210ENST00000474873 CFAP69A5D8W1 941 aa8.08□□□□□ -1.12
HPS1-210ENST00000474873 IGLON5A6NGN9 336 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms