RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 LAMP2P13473 410 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ADRA1DP25100 572 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 OAS2P29728 719 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 EIF2DP41214 584 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 CD86P42081 329 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 MAPK8P45983 427 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ARCN1P48444 511 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 SESN2P58004 480 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 MAXP61244 160 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 RPL26P61254 145 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 AP1S1P61966 158 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 IFFO1Q0D2I5 559 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 OLIG2Q13516 323 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ZNF235Q14590 738 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 CRYMQ14894 314 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 SLC1A5Q15758 541 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 KRT71Q3SY84 523 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 FUT11Q495W5 492 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ANKRD20A4Q4UJ75 823 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 HSP90B2PQ58FF3 399 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 DGKKQ5KSL6 1271 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 CERCAMQ5T4B2 595 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 SYCP2LQ5T4T6 812 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 TMEM215Q68D42 235 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 VITQ6UXI7 678 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 SH2D5Q6ZV89 423 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 MARK2Q7KZI7 788 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 AHI1Q8N157 1196 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 PHTF2Q8N3S3 785 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 SH2D3CQ8N5H7 860 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 IPMKQ8NFU5 416 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 DCAKDQ8WVC6 231 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ATP2A3Q93084 1043 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ECHDC3Q96DC8 303 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 MYO19Q96H55 970 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ASB2Q96Q27 587 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 FICDQ9BVA6 458 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 CINPQ9BW66 212 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 TDRD1Q9BXT4 1180 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 CPEB1Q9BZB8 566 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 ZFP14Q9HCL3 533 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 HPS4Q9NQG7 708 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 SMYD2Q9NRG4 433 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 THG1LQ9NWX6 298 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 PLK2Q9NYY3 685 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 UBP1Q9NZI7 540 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 CDH22Q9UJ99 828 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 RPL26L1Q9UNX3 145 aaKnown RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 PPIL1Q9Y3C6 166 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 TCAF1Q9Y4C2 921 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 C5orf42Q9H799 3197 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 KIF26AQ9ULI4 1882 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-207ENST00000474825 BPTFQ12830 3046 aa6.68□□□□□ -1.34
ATG4A-207ENST00000474825 EYSQ5T1H1 3165 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 UNC80Q8N2C7 3258 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 EXOC1LA0A1B0GW35 172 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 OTOL1A6NHN0 477 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 GOLGA6L10A6NI86 522 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 CXorf49A8MYA2 514 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 NEDD8-MDP1E9PL57 170 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 F5H423 210 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 K7ERQ8 282 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SMAD6O43541 496 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TIMM44O43615 452 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LDB2O43679 373 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SOCS5O75159 536 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 PMPCBO75439 489 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 GJB3O75712 270 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 NEBLO76041 1014 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ASLP04424 464 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SRPRAP08240 638 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ARSAP15289 507 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ARNTP27540 789 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 CHRNA4P43681 627 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SLC18A1P54219 525 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 CRADDP78560 199 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 ECT2LQ008S8 904 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 MGAT5Q09328 741 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 NR1H3Q13133 447 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 DNAJC3Q13217 504 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LAMB3Q13751 1172 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LONRF1Q17RB8 773 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 KBTBD12Q3ZCT8 623 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SIRPB2Q5JXA9 342 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 HP1BP3Q5SSJ5 553 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TEDDM1Q5T9Z0 273 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 KIAA0930Q6ICG6 404 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TRMT10BQ6PF06 316 aaKnown RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LINGO4Q6UY18 593 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 LEKR1Q6ZMV7 388 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 TIFABQ6ZNK6 161 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 GET4Q7L5D6 327 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-207ENST00000474825 NLRP9Q7RTR0 991 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 GALNT7Q86SF2 657 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SRLQ86TD4 932 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 EXOC3L1Q86VI1 746 aa6.67□□□□□ -1.34
ATG4A-207ENST00000474825 SLC26A11Q86WA9 606 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms