RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CA9Q16790 459 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 UGP2Q16851 508 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 ARFGAP1Q8N6T3 406 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 LMX1AQ8TE12 382 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 PEBP4Q96S96 227 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 KCTD15Q96SI1 283 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 IL12RB2Q99665 862 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 WRAP53Q9BUR4 548 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 SLC13A1Q9BZW2 595 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 SLC39A8Q9C0K1 460 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 ABCG4Q9H172 646 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 ATP13A3Q9H7F0 1226 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 SP110Q9HB58 689 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 KLF15Q9UIH9 416 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 SALL4Q9UJQ4 1053 aa20.56■□□□□ 0.88
PDLIM4-206ENST00000474421 TMEM110-MUSTN1A8MSY1 372 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 DDX3XO00571 662 aaKnown RBP eCLIP20.55■□□□□ 0.886e-12■■■■□ 19.8
PDLIM4-206ENST00000474421 OPA1O60313 960 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 PIGNO95427 931 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 ERCC2P18074 760 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 SERPINA4P29622 427 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 PCK1P35558 622 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 PEX5P50542 639 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 SEMG2Q02383 582 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 LRRC14Q15048 493 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 PPP6R3Q5H9R7 873 aaPredicted RBP20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 AFMIDQ63HM1 303 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 MACC1Q6ZN28 852 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 PDZD3Q86UT5 571 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 LZTR1Q8N653 840 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 TP53I13Q8NBR0 393 aaPredicted RBP20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 GLMNQ92990 594 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 DEPDC7Q96QD5 511 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 CINPQ9BW66 212 aaPredicted RBP20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 ZWILCHQ9H900 591 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 PCDH12Q9NPG4 1184 aa20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 APOBEC3BQ9UH17 382 aaKnown RBP20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 BZW2Q9Y6E2 419 aaKnown RBP20.55■□□□□ 0.88
PDLIM4-206ENST00000474421 LRRK1Q38SD2 2015 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 BLKP51451 505 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 IL10RBQ08334 325 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 NSUN2Q08J23 767 aaKnown RBP eCLIP20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 IQCB1Q15051 598 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 TPRG1LQ5T0D9 272 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 CDCP2Q5VXM1 449 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 E4F1Q66K89 784 aaPredicted RBP20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 KDM7AQ6ZMT4 941 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 SRLQ86TD4 932 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 PHACTR4Q8IZ21 702 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 TRIM7Q9C029 511 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 ISCUQ9H1K1 167 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 ATP8A1Q9Y2Q0 1164 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 ANKRD36A6QL64 1941 aa20.54■□□□□ 0.88
PDLIM4-206ENST00000474421 LY6G6EA0A0G2JKS1 128 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 CFAP69A5D8W1 941 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 DFFAO00273 331 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 RRP8O43159 456 aaKnown RBP20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 LRCH4O75427 683 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 ITIH2P19823 946 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 ACTN2P35609 894 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 EIF4A3P38919 411 aaKnown RBP20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 RPIAP49247 311 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 RENBPP51606 427 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 POLR2LP62875 67 aaKnown RBP20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 PPARDQ03181 441 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 IRF4Q15306 451 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 NR0B2Q15466 257 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 PRRT3Q5FWE3 981 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 FAXCQ5TGI0 409 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 LRRC69Q6ZNQ3 347 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 CAMK1DQ8IU85 385 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 ARHGAP12Q8IWW6 846 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 ATL2Q8NHH9 583 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 TPCN2Q8NHX9 752 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 IFI44Q8TCB0 444 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 MAPK15Q8TD08 544 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 SYN2Q92777 582 aaPredicted RBP20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 DCBLD2Q96PD2 775 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 FUCA2Q9BTY2 467 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 CAAP1Q9H8G2 361 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 MBNL1Q9NR56 388 aaKnown RBP20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 MYO1AQ9UBC5 1043 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 U3KQA8 63 aa20.53■□□□□ 0.88
PDLIM4-206ENST00000474421 ASXL3Q9C0F0 2248 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 A0A1W2PQJ5 194 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 LMO7DNF2Z398 122 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 H3BRJ5 948 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 BUB1BO60566 1050 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 SKILP12757 684 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 C6P13671 934 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 HTR1BP28222 390 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 MMP12P39900 470 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 ARL4AP40617 200 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 ABCG1P45844 678 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 DPYSQ14117 519 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 AGERQ15109 404 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 DEFB133Q30KQ1 61 aa20.52■□□□□ 0.88
PDLIM4-206ENST00000474421 BOLA3Q53S33 107 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms