RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TFE3P19532 575 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 TCN1P20061 433 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 SAT1P21673 171 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PAX3P23760 479 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 EMP3P54852 163 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 TMBIM6P55061 237 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 C21orf59P57076 290 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PLOD1Q02809 727 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 SEMA3BQ13214 749 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NME3Q13232 169 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 C16orf72Q14CZ0 275 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 MTX3Q5HYI7 312 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CERCAMQ5T4B2 595 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 KLHL35Q6PF15 583 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CUZD1Q86UP6 607 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PROSER1Q86XN7 944 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SLC41A1Q8IVJ1 513 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CLYBLQ8N0X4 340 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 LSMEM2Q8N112 164 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PYROXD2Q8N2H3 581 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 TMEM86AQ8N2M4 240 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 ATPAF2Q8N5M1 289 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PPTC7Q8NI37 304 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SLC16A10Q8TF71 515 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 EMID1Q96A84 441 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 RANBP9Q96S59 729 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 OLFM1Q99784 485 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 FSD1LQ9BXM9 530 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 OLAHQ9NV23 265 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 INTS10Q9NVR2 710 aaKnown RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 AP3M1Q9Y2T2 418 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PTCH2Q9Y6C5 1203 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CCDC162PA2VCL2 907 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 TRIM64A6NGJ6 449 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SAC3D1A6NKF1 404 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 F5H423 210 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 PIRO00625 290 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CLOCKO15516 846 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 MATN4O95460 622 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SPATA31D3P0C874 917 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 IMPDH1P20839 514 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 DCKP27707 260 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CAPGP40121 348 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 LHX1P48742 406 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GMPSP49915 693 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 NFKB2Q00653 900 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PRKCQQ04759 706 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GRSF1Q12849 480 aaKnown RBP eCLIP6.16□□□□□ -1.42
HERC4-209ENST00000473533 TOP3AQ13472 1001 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 DLG2Q15700 870 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 KIF19Q2TAC6 998 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 TECRLQ5HYJ1 363 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NHSL2Q5HYW2 709 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 C16orf87Q6PH81 154 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SPATA31D4Q6ZUB0 917 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 BEND5Q7L4P6 421 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SPATA19Q7Z5L4 167 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CENPLQ8N0S6 344 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 PCDH20Q8N6Y1 951 aaKnown RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 SHKBP1Q8TBC3 707 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 TRAPPC12Q8WVT3 735 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SDCCAG3Q96C92 435 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 L3HYPDHQ96EM0 354 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 DOK1Q99704 481 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CIB1Q99828 191 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 BCL7BQ9BQE9 202 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 BDH2Q9BUT1 245 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 OSBPL2Q9H1P3 480 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 POPDC3Q9HBV1 291 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CHRAC1Q9NRG0 131 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GIN1Q9NXP7 522 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 FBXO5Q9UKT4 447 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 TRAF6Q9Y4K3 522 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NRCAMQ92823 1304 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 C7orf72A4D263 438 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 IQCA1LA6NCM1 817 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CXCL11O14625 94 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 RASAL1O95294 804 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 ITGBL1O95965 494 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 CHEK2O96017 543 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 AHSGP02765 367 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 KCNE1P15382 129 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NMBRP28336 390 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GLRBP48167 497 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 MRPL19P49406 292 aaKnown RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 CCNYL2Q5T2Q4 361 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NEPROQ6NW34 567 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 GADL1Q6ZQY3 521 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 FASTKD5Q7L8L6 764 aaKnown RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 EEPD1Q7L9B9 569 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 MYO1HQ8N1T3 1032 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 SCML4Q8N228 414 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 RNF148Q8N7C7 305 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NXNL1Q96CM4 212 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 PPP1R36Q96LQ0 422 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 MLPHQ9BV36 600 aaPredicted RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 WDCPQ9H6R7 721 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 NOL11Q9H8H0 719 aaKnown RBP6.16□□□□□ -1.42
HERC4-209ENST00000473533 CXorf21Q9HAI6 301 aa6.16□□□□□ -1.42
HERC4-209ENST00000473533 CDHR5Q9HBB8 845 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms