RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 FER1L5A0AVI2 2057 aa10.36□□□□□ -0.75
CDHR3-209ENST00000472116 MDC1Q14676 2089 aaKnown RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 ANKUB1A6NFN9 424 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 C16orf96A6NNT2 1141 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 K7ERQ8 282 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 RNF103O00237 685 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 KATNA1O75449 491 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 THRAP10827 490 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 KRT13P13646 458 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 GPR3P46089 330 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 GCLMP48507 274 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 VAMP7P51809 220 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 YWHAEP62258 255 aaKnown RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 MTA1Q13330 715 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 RETSATQ6NUM9 610 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 CTRCQ99895 268 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 LUZP4Q9P127 313 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 RCOR3Q9P2K3 495 aaPredicted RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 VPS51Q9UID3 782 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 FBXO2Q9UK22 296 aaPredicted RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 ITM2BQ9Y287 266 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 ZNF451Q9Y4E5 1061 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 TMEM184BQ9Y519 407 aaPredicted RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 SRPRBQ9Y5M8 271 aaKnown RBP10.35□□□□□ -0.75
CDHR3-209ENST00000472116 POLEQ07864 2286 aa10.35□□□□□ -0.75
CDHR3-209ENST00000472116 DOCK4Q8N1I0 1966 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SMAD6O43541 496 aaKnown RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SNAP91O60641 907 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 DNAJB5O75953 348 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 VDRP11473 427 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 KELP23276 732 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 MPSTP25325 297 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 ABL2P42684 1182 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 CCNHP51946 323 aaPredicted RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SEMA5AQ13591 1074 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 MAP7Q14244 749 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 LRRC14Q15048 493 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 IRF4Q15306 451 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 KLHL40Q2TBA0 621 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 CARD16Q5EG05 197 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 JMJD6Q6NYC1 403 aaPredicted RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 FBXL22Q6P050 247 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 LINGO4Q6UY18 593 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SPNS3Q6ZMD2 512 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 HPS6Q86YV9 775 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 IRF2BP1Q8IU81 584 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SLC9A9Q8IVB4 645 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 PCDH20Q8N6Y1 951 aaKnown RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 DCAF4L2Q8NA75 395 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 CLEC4CQ8WTT0 213 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SEC14L1Q92503 715 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 PDXPQ96GD0 296 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 AHCYL2Q96HN2 611 aaKnown RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 CLIC6Q96NY7 704 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 APOOQ9BUR5 198 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 CEP44Q9C0F1 390 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 CUEDC2Q9H467 287 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 FAM204AQ9H8W3 233 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 SLC39A2Q9NP94 309 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 ACSS2Q9NR19 701 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 MBNL1Q9NR56 388 aaKnown RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 LATS2Q9NRM7 1088 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 MOSPD1Q9UJG1 213 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 VANGL2Q9ULK5 521 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 PCDHGA9Q9Y5G4 932 aaKnown RBP10.34□□□□□ -0.75
CDHR3-209ENST00000472116 OR51B4Q9Y5P0 310 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 DGKBQ9Y6T7 804 aa10.34□□□□□ -0.75
CDHR3-209ENST00000472116 POLR1CO15160 346 aaPredicted RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 MMP20O60882 483 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 ADCY5O95622 1261 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 TRUB2O95900 331 aaKnown RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 NR3C1P04150 777 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 ITGA3P26006 1051 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CD1CP29017 333 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CASP14P31944 242 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CCR1P32246 355 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 PTGER4P35408 488 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CDH4P55283 916 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 MAZP56270 477 aaKnown RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 MC2RQ01718 297 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 PEX6Q13608 980 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CHRNA6Q15825 494 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 TSR1Q2NL82 804 aaKnown RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 ZNF805Q5CZA5 627 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM71Q6P5X7 295 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 UNC13DQ70J99 1090 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 ZNF438Q7Z4V0 828 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 MMP21Q8N119 569 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 TP53I13Q8NBR0 393 aaPredicted RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 OR52K2Q8NGK3 314 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 STAMBPL1Q96FJ0 436 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 HSFY1Q96LI6 401 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 PRMT1Q99873 361 aaKnown RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 FBXO8Q9NRD0 319 aa10.33□□□□□ -0.76
CDHR3-209ENST00000472116 HECAQ9UBI9 543 aaPredicted RBP10.33□□□□□ -0.76
CDHR3-209ENST00000472116 CROTQ9UKG9 612 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms