RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ECHDC3Q96DC8 303 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 TSGA13Q96PP4 275 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 LENG8Q96PV6 779 aaPredicted RBP9.24□□□□□ -0.93
SYN3-211ENST00000472027 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 BAG1Q99933 345 aaPredicted RBP9.24□□□□□ -0.93
SYN3-211ENST00000472027 MGME1Q9BQP7 344 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 WRAP53Q9BUR4 548 aaKnown RBP9.24□□□□□ -0.93
SYN3-211ENST00000472027 C1QTNF2Q9BXJ5 285 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 GOLPH3Q9H4A6 298 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 ERVMER34-1Q9H9K5 563 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 SCUBE2Q9NQ36 999 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 DDX56Q9NY93 547 aaKnown RBP9.24□□□□□ -0.93
SYN3-211ENST00000472027 SALL4Q9UJQ4 1053 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
SYN3-211ENST00000472027 PLXNA2O75051 1894 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 SPAARA0A1B0GVQ0 90 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 POM121BA6NF01 834 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 ZNF487B1APH4 448 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 RIOK3O14730 519 aaKnown RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 FPGTO14772 594 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 APOL1O14791 398 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 MATN3O15232 486 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 FLRT2O43155 660 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 PCDHGA12O60330 932 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 CBFA2T3O75081 653 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 IPO7O95373 1038 aaKnown RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 KRT1P04264 644 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 PRKCGP05129 697 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 MX2P20592 715 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 RXRGP48443 463 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 CCT8P50990 548 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 POLR2LP62875 67 aaKnown RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 ITKQ08881 620 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 BNIP3Q12983 259 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 TRIP6Q15654 476 aaKnown RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 SLC9A4Q6AI14 798 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 ERAP2Q6P179 960 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 GCNT7Q6ZNI0 430 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 Q6ZSR6 202 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 ABI3BPQ7Z7G0 1075 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 VSIG1Q86XK7 387 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 RFX6Q8HWS3 928 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 TMEM139Q8IV31 216 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 OXR1Q8N573 874 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 PLD5Q8N7P1 536 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 CCNYQ8ND76 341 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 ACRBPQ8NEB7 543 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 OR13H1Q8NG92 308 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 FAM174AQ8TBP5 190 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 MAML1Q92585 1016 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 FATE1Q969F0 183 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 CENPTQ96BT3 561 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 KLF6Q99612 283 aaPredicted RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 NOD2Q9HC29 1040 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 NT5MQ9NPB1 228 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 RBM22Q9NW64 420 aaKnown RBP eCLIP9.23□□□□□ -0.93
SYN3-211ENST00000472027 DTLQ9NZJ0 730 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 PCOLCE2Q9UKZ9 415 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 REXO2Q9Y3B8 237 aaKnown RBP9.23□□□□□ -0.93
SYN3-211ENST00000472027 PCDHGC4Q9Y5F7 938 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 HEY1Q9Y5J3 304 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 DUSP10Q9Y6W6 482 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 GON4LQ3T8J9 2241 aa9.23□□□□□ -0.93
SYN3-211ENST00000472027 DMXL1Q9Y485 3027 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 ZNF292O60281 2723 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 A0A1W2PQ67 120 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 A6NNZ2 444 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 BTNL10A8MVZ5 291 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 HTRA2O43464 458 aaPredicted RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 PSTPIP1O43586 416 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 ITGAVP06756 1048 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 CCNB1P14635 433 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 ZFXP17010 805 aaPredicted RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 GRK6P43250 576 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 ARRB1P49407 418 aaPredicted RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 LIG3P49916 1009 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 NAP1L1P55209 391 aaKnown RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 SIM1P81133 766 aaPredicted RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 SEMG2Q02383 582 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 RALGPS1Q5JS13 557 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 MFSD7Q6UXD7 560 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 NPNTQ6UXI9 565 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 DAAM2Q86T65 1068 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 GATAD2AQ86YP4 633 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 DCP2Q8IU60 420 aaKnown RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 SLC22A18ASQ8N1D0 253 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 PAF1Q8N7H5 531 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 TPCN2Q8NHX9 752 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 SAP25Q8TEE9 199 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 PDCD6IPQ8WUM4 868 aaKnown RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 HDAC11Q96DB2 347 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 CALR3Q96L12 384 aaKnown RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 LGMNQ99538 433 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 SEMA3CQ99985 751 aa9.22□□□□□ -0.93
SYN3-211ENST00000472027 POLR1EQ9GZS1 481 aaKnown RBP9.22□□□□□ -0.93
SYN3-211ENST00000472027 LACRTQ9GZZ8 138 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms