RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 HNRNPDQ14103 355 aaKnown RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 PRPSAP1Q14558 356 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 RFTN1Q14699 578 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 SLMAPQ14BN4 828 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF77Q15935 545 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 PARP6Q2NL67 630 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 SPDYCQ5MJ68 293 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 STXBP5Q5T5C0 1151 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 IZUMO3Q5VZ72 239 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 RFWD3Q6PCD5 774 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 TFAP2DQ7Z6R9 452 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ARID3BQ8IVW6 561 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ARHGAP12Q8IWW6 846 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 NPWQ8N729 165 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 C12orf76Q8N812 135 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ZSCAN18Q8TBC5 510 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 DDI1Q8WTU0 396 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 CASKIN2Q8WXE0 1202 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ANKRD7Q92527 254 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 USP13Q92995 863 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ART4Q93070 314 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 IGSF8Q969P0 613 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 EXOC4Q96A65 974 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 P2RY11Q96G91 374 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 FMO2Q99518 471 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 LGMNQ99538 433 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 FAM118BQ9BPY3 351 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 SLC2A11Q9BYW1 496 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 TRIM31Q9BZY9 425 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 SLC39A8Q9C0K1 460 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 DPH5Q9H2P9 285 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 CLEC4MQ9H2X3 399 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 ACBD3Q9H3P7 528 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 SP110Q9HB58 689 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 TRPV4Q9HBA0 871 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 EIF2B3Q9NR50 452 aaKnown RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 DLL3Q9NYJ7 618 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 KLHL8Q9P2G9 620 aaPredicted RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 IPO11Q9UI26 975 aaKnown RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 CDH7Q9ULB5 785 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 TPX2Q9ULW0 747 aaKnown RBP6.75□□□□□ -1.33
VAMP3-202ENST00000470357 SNX24Q9Y343 169 aa6.75□□□□□ -1.33
VAMP3-202ENST00000470357 USP24Q9UPU5 2620 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 GOLGA6L7A0A1B0GV03 622 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ESYT3A0FGR9 886 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 E7EVH7 732 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 H0Y626 953 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 GFRA2O00451 464 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 EIF3HO15372 352 aaKnown RBP eCLIP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ATP8B1O43520 1251 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 GREM1O60565 184 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MAFKO60675 156 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TBL1XO60907 577 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 PPFIA2O75334 1257 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ANXA9O76027 345 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 CNTN5O94779 1100 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 NFATC1O95644 943 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 CCNB1P14635 433 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 AOC1P19801 751 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TPSB2P20231 275 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 IVDP26440 423 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 RPL22P35268 128 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 HSPA9P38646 679 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MAGEA6P43360 314 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TNNT3P45378 269 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 IFNAR2P48551 515 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 CARSP49589 748 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 VPS41P49754 854 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 PAPOLAP51003 745 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ITGA8P53708 1063 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 RPS24P62847 133 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 NTHL1P78549 312 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 BASP1P80723 227 aaKnown RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TNK2Q07912 1038 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 SLC20A2Q08357 652 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 SERINC3Q13530 473 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 GRM2Q14416 872 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 DMC1Q14565 340 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 PDGFRLQ15198 375 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 E2F5Q15329 346 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ANGPT1Q15389 498 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TPSAB1Q15661 275 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 PREPLQ4J6C6 727 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 TEX44Q53QW1 395 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ALFQ53S48 1182 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ANKRD20A2Q5SQ80 823 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ANKRD20A1Q5TYW2 823 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MARC1Q5VT66 337 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ANKRD20A3Q5VUR7 823 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 IL31Q6EBC2 164 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 HIBCHQ6NVY1 386 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MTSS1LQ765P7 747 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 GET4Q7L5D6 327 aaPredicted RBP6.74□□□□□ -1.33
VAMP3-202ENST00000470357 PID1Q7Z2X4 250 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 DGLUCYQ7Z3D6 616 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF354CQ86Y25 554 aa6.74□□□□□ -1.33
VAMP3-202ENST00000470357 MFN1Q8IWA4 741 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms