RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, human

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC1-208	ENST00000469102	DUX5	Q96PT3	197 aa		4.63	□□□□□ -1.67
CMC1-208	ENST00000469102	EYA3	Q99504	573 aa		4.63	□□□□□ -1.67
CMC1-208	ENST00000469102	PPCS	Q9HAB8	311 aa		4.63	□□□□□ -1.67
CMC1-208	ENST00000469102	CYSLTR2	Q9NS75	346 aa		4.63	□□□□□ -1.67
CMC1-208	ENST00000469102	ALKBH4	Q9NXW9	302 aa		4.63	□□□□□ -1.67
CMC1-208	ENST00000469102	HSPA12A	O43301	675 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	KLK8	O60259	260 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	ZNF432	O94892	652 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	IGHV4-30-4	P0DP06	118 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	DAO	P14920	347 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	MT3	P25713	68 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	BRWD1-AS2	P59051	145 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	POU5F1B	Q06416	359 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	ZNF718	Q3SXZ3	478 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	C9orf50	Q5SZB4	431 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	ATG16L1	Q676U5	607 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	CES5A	Q6NT32	575 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	KLHL24	Q6TFL4	600 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	TBC1D26	Q86UD7	250 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	PARP16	Q8N5Y8	322 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	GJC3	Q8NFK1	279 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	ADGRG7	Q96K78	797 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	RETREG1	Q9H6L5	497 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	RIC8A	Q9NPQ8	531 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	NFS1	Q9Y697	457 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	A3GALT2	U3KPV4	340 aa		4.62	□□□□□ -1.67
CMC1-208	ENST00000469102	TYW5	A2RUC4	315 aa	Known RBP	4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	WNT9B	O14905	357 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	LDB3	O75112	727 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	ZNF8	P17098	575 aa	Predicted RBP	4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	PTPN2	P17706	415 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	NR1H2	P55055	460 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	DLX5	P56178	289 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	KRTAP10-7	P60409	375 aa	Predicted RBP	4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	CHRND	Q07001	517 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	SNTA1	Q13424	505 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	EFNB3	Q15768	340 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	ZNF672	Q499Z4	452 aa	Predicted RBP	4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	WBP2NL	Q6ICG8	309 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	SHF	Q7M4L6	423 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	ADGRG6	Q86SQ4	1221 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	FAM160B2	Q86V87	743 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	PLD5	Q8N7P1	536 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	ERGIC1	Q969X5	290 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	TTYH1	Q9H313	450 aa	Predicted RBP	4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	TMEM160	Q9NX00	188 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	PEMT	Q9UBM1	199 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	HSF4	Q9ULV5	492 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	ICAM5	Q9UMF0	924 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	NFE2L3	Q9Y4A8	694 aa		4.61	□□□□□ -1.67
CMC1-208	ENST00000469102	hDV102S1	A0JD36	115 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	SLC2A4	P14672	509 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	UBE3A	Q05086	875 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	ZNF628	Q5EBL2	1059 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	NEK10	Q6ZWH5	1172 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	RFLNB	Q8N5W9	214 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	SNTG1	Q9NSN8	517 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	SLC9A2	Q9UBY0	812 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	MALT1	Q9UDY8	824 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	PAM16	Q9Y3D7	125 aa		4.6	□□□□□ -1.67
CMC1-208	ENST00000469102	MAGEA13P	A6NCF6	341 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	TEX22	C9J3V5	150 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	TULP2	O00295	520 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	EIF3F	O00303	357 aa	Predicted RBP	4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	KRT86	O43790	486 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	ZIC3	O60481	467 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	UROD	P06132	367 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	EFNA5	P52803	228 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	HDAC4	P56524	1084 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	YWHAZ	P63104	245 aa	Known RBP	4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	TDG	Q13569	410 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	RUNX2	Q13950	521 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	KRT81	Q14533	505 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	ARHGEF6	Q15052	776 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	KRTAP24-1	Q3LI83	254 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	SERTAD4-AS1	Q5TG53	156 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	LRRC8E	Q6NSJ5	796 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	NOXA1	Q86UR1	476 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	ZC3HC1	Q86WB0	502 aa	Known RBP	4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	KIAA2013	Q8IYS2	634 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	ANKRD42	Q8N9B4	389 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	SPATA20	Q8TB22	786 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	BICD1	Q96G01	975 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	IL17F	Q96PD4	163 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	NOX4	Q9NPH5	578 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	BABAM1	Q9NWV8	329 aa		4.59	□□□□□ -1.67
CMC1-208	ENST00000469102	GOLGA6L10	A0A0M3HER8	536 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE7	O76087	117 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	PMS2P2	O95744	297 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE12F	P0CL80	117 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE12G	P0CL81	117 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE12I	P0CL82	117 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	HNRNPH1	P31943	449 aa	Known RBP	4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	PEX5	P50542	639 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE1	Q13065	139 aa		4.58	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE4	Q13068	117 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms