RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ZFR2Q9UPR6 939 aaKnown RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
COL4A6-205ENST00000468338 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 FADS3Q9Y5Q0 445 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 SNX11Q9Y5W9 270 aa11.3□□□□□ -0.6
COL4A6-205ENST00000468338 A0A1W2PQU0 124 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 C16orf96A6NNT2 1141 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 CDK2AP1O14519 115 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 GIPC1O14908 333 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 SPINT1O43278 529 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 CBFA2T3O75081 653 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 LCA5LO95447 670 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 IGSF6O95976 241 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 PEX11BO96011 259 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF75DP51815 510 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 TAS2R40P59535 323 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 RHOAP61586 193 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 NSUN2Q08J23 767 aaKnown RBP eCLIP11.29□□□□□ -0.63e-9■■■■■ 39.7
COL4A6-205ENST00000468338 OVGP1Q12889 678 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 RFTN1Q14699 578 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-205ENST00000468338 HADHQ16836 314 aaKnown RBP11.29□□□□□ -0.6
COL4A6-205ENST00000468338 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 SETMARQ53H47 684 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-205ENST00000468338 TBCELQ5QJ74 424 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 N4BP2L1Q5TBK1 243 aaPredicted RBP11.29□□□□□ -0.6
COL4A6-205ENST00000468338 LAYNQ6UX15 382 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 ARHGAP36Q6ZRI8 547 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 ZSCAN30Q86W11 494 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF354CQ86Y25 554 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 OR6K2Q8NGY2 324 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 SLC35G2Q8TBE7 412 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 HCAR2Q8TDS4 363 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 HSPH1Q92598 858 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 FAF2Q96CS3 445 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 SERAC1Q96JX3 654 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 ZDHHC6Q9H6R6 413 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 TM7SF3Q9NS93 570 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
COL4A6-205ENST00000468338 IPO11Q9UI26 975 aaKnown RBP11.29□□□□□ -0.6
COL4A6-205ENST00000468338 TSPAN11A1L157 253 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 PRAMEF26H0Y7S4 382 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 TLR4O00206 839 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 KRIT1O00522 736 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 INSIG1O15503 277 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 TSPAN6O43657 245 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 PCDHGA12O60330 932 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 DFNA5O60443 496 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 MAFKO60675 156 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 UGT2B4P06133 528 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 CD48P09326 243 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 PMLP29590 882 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 MAT2AP31153 395 aaKnown RBP11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 RGRP47804 291 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 RXRGP48443 463 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 CDH6P55285 790 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 NXPH1P58417 271 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
COL4A6-205ENST00000468338 RAD51Q06609 339 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
COL4A6-205ENST00000468338 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 FGL2Q14314 439 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 GRM3Q14832 879 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 PDK2Q15119 407 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 KIAA1161Q6NSJ0 714 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 PSAPL1Q6NUJ1 521 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 GDPD4Q6W3E5 623 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 RHOT2Q8IXI1 618 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 DEFB124Q8NES8 71 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ASB12Q8WXK4 309 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 SKA1Q96BD8 255 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 FEM1CQ96JP0 617 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF641Q96N77 438 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-205ENST00000468338 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF599Q96NL3 588 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 PSKH2Q96QS6 385 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF670Q9BS34 389 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 SLC32A1Q9H598 525 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ERVMER34-1Q9H9K5 563 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 RAB6BQ9NRW1 208 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 KNTC1P50748 2209 aa11.28□□□□□ -0.6
COL4A6-205ENST00000468338 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.6
COL4A6-205ENST00000468338 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 H0Y8X5 98 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 MUSKO15146 869 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SH3BP5O60239 455 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 BUB1BO60566 1050 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 PALMO75781 387 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 KRT7P08729 469 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 TIMP2P16035 220 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 CR2P20023 1033 aa11.27□□□□□ -0.61
COL4A6-205ENST00000468338 HNRNPA2B1P22626 353 aaKnown RBP11.27□□□□□ -0.61
COL4A6-205ENST00000468338 SERPINB6P35237 376 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms