RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 C1QTNF2Q9BXJ5 285 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 OSBPL8Q9BZF1 889 aa20.21■□□□□ 0.83
NPHP4-206ENST00000468253 ZFR2Q9UPR6 939 aaKnown RBP20.21■□□□□ 0.83
NPHP4-206ENST00000468253 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
NPHP4-206ENST00000468253 KNL1Q8NG31 2342 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 HACD1B0YJ81 288 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 APOC4-APOC2K7ER74 178 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 NEMP1O14524 444 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 VILLO15195 856 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 DDX3YO15523 660 aaKnown RBP20.2■□□□□ 0.82
NPHP4-206ENST00000468253 MTSS1O43312 755 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 TJP3O95049 919 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 APOC2P02655 101 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 PYGMP11217 842 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 XPAP23025 273 aaPredicted RBP20.2■□□□□ 0.82
NPHP4-206ENST00000468253 AP1B1Q10567 949 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 TMEM52BQ4KMG9 183 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 CFAP58Q5T655 872 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 NAPEPLDQ6IQ20 393 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 MFSD2AQ8NA29 543 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 SERAC1Q96JX3 654 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 LENG8Q96PV6 779 aaPredicted RBP20.2■□□□□ 0.82
NPHP4-206ENST00000468253 HEMGNQ9BXL5 484 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 SLC17A9Q9BYT1 436 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 HS3ST3A1Q9Y663 406 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 CAPN6Q9Y6Q1 641 aa20.2■□□□□ 0.82
NPHP4-206ENST00000468253 CACNA1EQ15878 2313 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 UPK3BL1B0FP48 263 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 UPK3BL2E5RIL1 263 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 CDX4O14627 284 aaPredicted RBP20.19■□□□□ 0.82
NPHP4-206ENST00000468253 RIOK3O14730 519 aaKnown RBP20.19■□□□□ 0.82
NPHP4-206ENST00000468253 GDF9O60383 454 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 NEBLO76041 1014 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 ENGP17813 658 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 CD38P28907 300 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 CSNK1EP49674 416 aaKnown RBP20.19■□□□□ 0.82
NPHP4-206ENST00000468253 SGCGQ13326 291 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 GSE1Q14687 1217 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 SLC45A4Q5BKX6 768 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 STPG1Q5TH74 334 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 ERAP2Q6P179 960 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 TFB1MQ8WVM0 346 aaKnown RBP20.19■□□□□ 0.82
NPHP4-206ENST00000468253 SEMA3CQ99985 751 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 TMEM9BQ9NQ34 198 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 RXFP3Q9NSD7 469 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 SAE1Q9UBE0 346 aaPredicted RBP20.19■□□□□ 0.82
NPHP4-206ENST00000468253 PPP2R2CQ9Y2T4 447 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 PPIL1Q9Y3C6 166 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 PCDHGC4Q9Y5F7 938 aa20.19■□□□□ 0.82
NPHP4-206ENST00000468253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.18■□□□□ 0.82
NPHP4-206ENST00000468253 A0A1W2PR77 199 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 KCNK1O00180 336 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 SPINT1O43278 529 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 MAGEC1O60732 1142 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 FTCDO95954 541 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 NFKBIAP25963 317 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 MAT2AP31153 395 aaKnown RBP20.18■□□□□ 0.82
NPHP4-206ENST00000468253 MAXP61244 160 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 ITKQ08881 620 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 STAT4Q14765 748 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 PRKD1Q15139 912 aaPredicted RBP20.18■□□□□ 0.82
NPHP4-206ENST00000468253 LLGL1Q15334 1064 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 TEX44Q53QW1 395 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 CNTD1Q8N815 330 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 ARRDC2Q8TBH0 407 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 EDEM2Q9BV94 578 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 PCDH12Q9NPG4 1184 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 DLL3Q9NYJ7 618 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 PHTF1Q9UMS5 762 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 ANKRD6Q9Y2G4 727 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 SLCO1B1Q9Y6L6 691 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 PI4KAP42356 2102 aa20.18■□□□□ 0.82
NPHP4-206ENST00000468253 IGLON5A6NGN9 336 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 SLC30A4O14863 429 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 DFNA5O60443 496 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 GJB3O75712 270 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 ZNF189O75820 626 aaPredicted RBP20.17■□□□□ 0.82
NPHP4-206ENST00000468253 PECAM1P16284 738 aaPredicted RBP20.17■□□□□ 0.82
NPHP4-206ENST00000468253 HNRNPA2B1P22626 353 aaKnown RBP20.17■□□□□ 0.82
NPHP4-206ENST00000468253 AKT2P31751 481 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 ATXN3P54252 364 aaPredicted RBP20.17■□□□□ 0.82
NPHP4-206ENST00000468253 SEL1L3Q68CR1 1132 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 ZSWIM9Q86XI8 627 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 TMEM145Q8NBT3 493 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 TRIM58Q8NG06 486 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 ALS2CR12Q96Q35 445 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 VAT1Q99536 393 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 LZTFL1Q9NQ48 299 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 DNAAF2Q9NVR5 837 aaKnown RBP20.17■□□□□ 0.82
NPHP4-206ENST00000468253 RAI2Q9Y5P3 530 aa20.17■□□□□ 0.82
NPHP4-206ENST00000468253 NYNRINQ9P2P1 1898 aaKnown RBP20.16■□□□□ 0.82
NPHP4-206ENST00000468253 RALGAPA1Q6GYQ0 2036 aa20.16■□□□□ 0.82
NPHP4-206ENST00000468253 A0A1B0GVT2 93 aa20.16■□□□□ 0.82
NPHP4-206ENST00000468253 TTC24A2A3L6 582 aaPredicted RBP20.16■□□□□ 0.82
NPHP4-206ENST00000468253 TM4SF5O14894 197 aa20.16■□□□□ 0.82
NPHP4-206ENST00000468253 SLC31A1O15431 190 aa20.16■□□□□ 0.82
NPHP4-206ENST00000468253 FZD6O60353 706 aa20.16■□□□□ 0.82
NPHP4-206ENST00000468253 PGLSO95336 258 aa20.16■□□□□ 0.82
NPHP4-206ENST00000468253 PAK4O96013 591 aaPredicted RBP20.16■□□□□ 0.82
NPHP4-206ENST00000468253 HLA-DQB2P05538 268 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms