RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GANCQ8TET4 914 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 PDCD6IPQ8WUM4 868 aaKnown RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 IFT43Q96FT9 208 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 OXNAD1Q96HP4 312 aaPredicted RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 FEM1CQ96JP0 617 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 NSMCE3Q96MG7 304 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 FBXL12Q9NXK8 326 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 UBP1Q9NZI7 540 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 USP36Q9P275 1121 aaKnown RBP15.34■□□□□ 0.05
SNIP1-202ENST00000468040 ASIC3Q9UHC3 531 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 FZD4Q9ULV1 537 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 PCDHB9Q9Y5E1 797 aa15.34■□□□□ 0.05
SNIP1-202ENST00000468040 A0A1W2PP55 124 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 C16orf96A6NNT2 1141 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 AXIN1O15169 862 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 TTI1O43156 1089 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 SLC7A4O43246 635 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 FZD6O60353 706 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 RNASEH2AO75792 299 aaKnown RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 CPP00450 1065 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 IGLV3-19P01714 112 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 XPAP23025 273 aaPredicted RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 DRD3P35462 400 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 LMAN1P49257 510 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 VPS41P49754 854 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 TPMTP51580 245 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 BASP1P80723 227 aaKnown RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 CDK18Q07002 472 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 FAXCQ5TGI0 409 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 KDELC1Q6UW63 502 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 PARS2Q7L3T8 475 aaKnown RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 NDUFAF2Q8N183 169 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 HDDC3Q8N4P3 179 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 AADATQ8N5Z0 425 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 IPMKQ8NFU5 416 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 RAB7BQ96AH8 199 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 ARRDC3Q96B67 414 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 GORASP1Q9BQQ3 440 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 MLPHQ9BV36 600 aaPredicted RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 CARD6Q9BX69 1037 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 FAM126AQ9BYI3 521 aaPredicted RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 LRRC40Q9H9A6 602 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 ETNK1Q9HBU6 452 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 ITM2CQ9NQX7 267 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 EIF2B3Q9NR50 452 aaKnown RBP15.33■□□□□ 0.04
SNIP1-202ENST00000468040 CHKBQ9Y259 395 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 KMT2EQ8IZD2 1858 aa15.33■□□□□ 0.04
SNIP1-202ENST00000468040 UPK3BL1B0FP48 263 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 UPK3BL2E5RIL1 263 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 AP2A1O95782 977 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 APRTP07741 180 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 TDGF1P13385 188 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 ADRB3P13945 408 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 OXTRP30559 389 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 ADCY8P40145 1251 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 P2RY2P41231 377 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 GRIA4P48058 902 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 METAP1P53582 386 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 EPHB1P54762 984 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
SNIP1-202ENST00000468040 CNTN1Q12860 1018 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 UGP2Q16851 508 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 KCTD11Q693B1 232 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 NAPEPLDQ6IQ20 393 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 C8orf74Q6P047 294 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 TSSK4Q6SA08 328 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 TTC7BQ86TV6 843 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 MAML2Q8IZL2 1156 aaPredicted RBP15.32■□□□□ 0.04
SNIP1-202ENST00000468040 MMGT1Q8N4V1 131 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 TAB3Q8N5C8 712 aaPredicted RBP15.32■□□□□ 0.04
SNIP1-202ENST00000468040 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
SNIP1-202ENST00000468040 FAM131CQ96AQ9 280 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 MRGPRX2Q96LB1 330 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 TRIB3Q96RU7 358 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 TPSD1Q9BZJ3 242 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 PHTF1Q9UMS5 762 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 ANKRD36A6QL64 1941 aa15.32■□□□□ 0.04
SNIP1-202ENST00000468040 LOC285095A0A1B0GVY8 99 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 DLL1O00548 723 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 NDC80O14777 642 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 RAD51CO43502 376 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 NDST3O95803 873 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 PRLP01236 227 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 PDHA1P08559 390 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 HLA-DPA1P20036 260 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 PXNP49023 591 aaPredicted RBP15.31■□□□□ 0.04
SNIP1-202ENST00000468040 CDK16Q00536 496 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 ZNF528Q3MIS6 628 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 USP39Q53GS9 565 aaKnown RBP15.31■□□□□ 0.04
SNIP1-202ENST00000468040 PIP5KL1Q5T9C9 394 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 AGBL4Q5VU57 503 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 ERAP2Q6P179 960 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.31■□□□□ 0.04
SNIP1-202ENST00000468040 USP45Q70EL2 814 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 PCGF5Q86SE9 256 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 LINC00523Q86TU6 105 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 WDR5BQ86VZ2 330 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 LONP2Q86WA8 852 aa15.31■□□□□ 0.04
SNIP1-202ENST00000468040 ZSWIM9Q86XI8 627 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms