RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 RINT1Q6NUQ1 792 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 USP49Q70CQ1 688 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 HTR3DQ70Z44 454 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 TMPRSS6Q8IU80 811 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SCN4BQ8IWT1 228 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 TTC30BQ8N4P2 665 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 UCMAQ8WVF2 138 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 GRAMD1AQ96CP6 724 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 MMS19Q96T76 1030 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 ACOX2Q99424 681 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SEMA3CQ99985 751 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 MSTO1Q9BUK6 570 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 ACE2Q9BYF1 805 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 TM6SF1Q9BZW5 370 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 CD244Q9BZW8 370 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 TMEM60Q9H2L4 133 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SLC6A20Q9NP91 592 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 CD93Q9NPY3 652 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 THSD1Q9NS62 852 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 STARD5Q9NSY2 213 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 DDX19AQ9NUU7 478 aaKnown RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 LRWD1Q9UFC0 647 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 GTF3C4Q9UKN8 822 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 L1RE1Q9UN81 338 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 SLC27A6Q9Y2P4 619 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 CYP46A1Q9Y6A2 500 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 STON1Q9Y6Q2 735 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 MYOFQ9NZM1 2061 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 AHCTF1Q8WYP5 2266 aa5.69□□□□□ -1.5
PTCD3-207ENST00000467273 TLN1Q9Y490 2541 aaKnown RBP5.69□□□□□ -1.5
PTCD3-207ENST00000467273 KNL1Q8NG31 2342 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 MYH10P35580 1976 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 PRRT4C9JH25 899 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 PYCARD-AS1I3L0S3 204 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 SCDO00767 359 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 KLK10O43240 276 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 RTN3O95197 1032 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 MBL2P11226 248 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 TYRP14679 529 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 CKMT2P17540 419 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 CR2P20023 1033 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ACO1P21399 889 aaKnown RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ABCB4P21439 1286 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ACP1P24666 158 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 CCR10P46092 362 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ARRB1P49407 418 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 BCAT1P54687 386 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 C21orf59P57076 290 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 GOLGA8FQ08AF8 430 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 GOLGA8DPQ0D2H9 430 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 TRIM29Q14134 588 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 BRD3Q15059 726 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 SLFN12LQ6IEE8 588 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 TMEM25Q86YD3 366 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 WDR75Q8IWA0 830 aaKnown RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 CCDC83Q8IWF9 413 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 BBS7Q8IWZ6 715 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 RBM12BQ8IXT5 1001 aaKnown RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 DIS3L2Q8IYB7 885 aaKnown RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 SAP25Q8TEE9 199 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 YIPF4Q9BSR8 244 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 VPS11Q9H270 941 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ERVMER34-1Q9H9K5 563 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 POLR1BQ9H9Y6 1135 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 GJB4Q9NTQ9 266 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 THAP10Q9P2Z0 257 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-207ENST00000467273 FBXO10Q9UK96 956 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 CDH9Q9ULB4 789 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 ODF2LQ9ULJ1 636 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 SRPK3Q9UPE1 567 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 RAD54BQ9Y620 910 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 CKAP5Q14008 2032 aa5.68□□□□□ -1.5
PTCD3-207ENST00000467273 TP53BP1Q12888 1972 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CLEC18AA5D8T8 446 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 NEDD8-MDP1E9PL57 170 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 KRIT1O00522 736 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 COCHO43405 550 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 PFKFB2O60825 505 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 ULK1O75385 1050 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 SEMA4FO95754 770 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CISD3P0C7P0 127 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 RXRGP48443 463 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 TRAPPC10P48553 1259 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 NEK2P51955 445 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 COPAP53621 1224 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 EPHB1P54762 984 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 CDH8P55286 799 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 TAF10Q12962 218 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 NFATC3Q12968 1075 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 STK3Q13188 491 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 DNAJC3Q13217 504 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 HECTD3Q5T447 861 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 SFMBT2Q5VUG0 894 aa5.67□□□□□ -1.5
PTCD3-207ENST00000467273 KRT79Q5XKE5 535 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms