RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TTLL2Q9BWV7 592 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 VN1R3Q9BXE9 311 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 MRPL9Q9BYD2 267 aaKnown RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 DRC3Q9H069 523 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 ILKAPQ9H0C8 392 aaPredicted RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 MMADHCQ9H3L0 296 aaPredicted RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 FAM96AQ9H5X1 160 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 MID2Q9UJV3 735 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 SCN5AQ14524 2016 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 LOC285095A0A1B0GVY8 99 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 MROH6A6NGR9 719 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 E9PBE3 544 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 F5H5T6 163 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 HOXA2O43364 376 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 KLHL41O60662 606 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 PIGNO95427 931 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 ATP5C1P36542 298 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 ABL2P42684 1182 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 MAPKAPK2P49137 400 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 YBEYP58557 167 aaPredicted RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 MXRA7P84157 204 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 TNK2Q07912 1038 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 CAPRIN2Q6IMN6 1127 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 OR7D4Q8NG98 312 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 NACA2Q9H009 215 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 WDR55Q9H6Y2 383 aaPredicted RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 MARCH4Q9P2E8 410 aaPredicted RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 DNMT3LQ9UJW3 386 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 ZFP37Q9Y6Q3 630 aaPredicted RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 MIA3Q5JRA6 1907 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 GOLGA8QA0A0J9YX86 632 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 LOC100653049A0A140TA62 436 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 GOLGA8OA6NCC3 632 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 GOLGA8NF8WBI6 632 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 DCXO43602 365 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 LDB2O43679 373 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 ZBTB14O43829 449 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 ACSL4O60488 711 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 H2AFYO75367 372 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 KRT34O76011 436 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 PDHA1P08559 390 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 PIRTP0C851 137 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 CPOXP36551 454 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 LEPRP48357 1165 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 POLD2P49005 469 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 ALDH7A1P49419 539 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 SLC12A2P55011 1212 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 RPS24P62847 133 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 SLC25A3Q00325 362 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 POU4F1Q01851 419 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 CSHL1Q14406 222 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 GALNT3Q14435 633 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 SLC8B1Q6J4K2 584 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 KIAA0408Q6ZU52 694 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 TMC7Q7Z402 723 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 LCA5Q86VQ0 697 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 CILP2Q8IUL8 1156 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 DENND1CQ8IV53 801 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 LSMEM2Q8N112 164 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 C2orf15Q8WU43 125 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 OSBPL1AQ9BXW6 950 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 POLR1EQ9GZS1 481 aaKnown RBP11.51□□□□□ -0.57
HPS1-208ENST00000467246 DCLRE1BQ9H816 532 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 PIDD1Q9HB75 910 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 GKN1Q9NS71 199 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 COMMD8Q9NX08 183 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 ZDHHC2Q9UIJ5 367 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 RAP2CQ9Y3L5 183 aa11.51□□□□□ -0.57
HPS1-208ENST00000467246 NEMP2A6NFY4 417 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 MATN2O00339 956 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 MAGEC1O60732 1142 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 FKTNO75072 461 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 KRT36O76013 467 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SEC24AO95486 1093 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 GLDCP23378 1020 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 HOXD9P28356 352 aaPredicted RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 ERFP50548 548 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 KPNA1P52294 538 aaPredicted RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 PEX6Q13608 980 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 ZNF235Q14590 738 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 LRRC43Q8N309 656 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 CCNYL1Q8N7R7 359 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SHKBP1Q8TBC3 707 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 CALML6Q8TD86 181 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 BLOC1S5Q8TDH9 187 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 SH3RF2Q8TEC5 729 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 TBATAQ96M53 351 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 IGSF5Q9NSI5 407 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 MTRRQ9UBK8 725 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 MTF2Q9Y483 593 aaPredicted RBP11.5□□□□□ -0.57
HPS1-208ENST00000467246 ARL5AQ9Y689 179 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 ZNF840PA6NDX5 716 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 NEMP1O14524 444 aa11.5□□□□□ -0.57
HPS1-208ENST00000467246 COCHO43405 550 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms