RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SLC22A11Q9NSA0 550 aa2.29□□□□□ -2.04
CCDC93-205ENST00000466171 GRHL1Q9NZI5 618 aa2.29□□□□□ -2.04
CCDC93-205ENST00000466171 OR6C3Q9NZP0 311 aa2.29□□□□□ -2.04
CCDC93-205ENST00000466171 LUZP4Q9P127 313 aa2.29□□□□□ -2.04
CCDC93-205ENST00000466171 KLQ9UEF7 1012 aa2.29□□□□□ -2.04
CCDC93-205ENST00000466171 SNX9Q9Y5X1 595 aa2.29□□□□□ -2.04
CCDC93-205ENST00000466171 hDV102S1A0JD36 115 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 OR6C68A6NDL8 312 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 ACKR2O00590 384 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 HEXIM1O94992 359 aaKnown RBP2.28□□□□□ -2.04
CCDC93-205ENST00000466171 PRSS1P07477 247 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 SSTR2P30874 369 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 DCTDP32321 178 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 SERPINF1P36955 418 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 FAM27E3Q08E93 113 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 LPIN1Q14693 890 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 IRAK1BP1Q5VVH5 260 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 JMJD6Q6NYC1 403 aaPredicted RBP2.28□□□□□ -2.04
CCDC93-205ENST00000466171 KLHL17Q6TDP4 642 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 BRSK2Q8IWQ3 736 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 MB21D2Q8IYB1 491 aaPredicted RBP2.28□□□□□ -2.04
CCDC93-205ENST00000466171 CCDC105Q8IYK2 499 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 CNBD1Q8NA66 436 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 DMBX1Q8NFW5 382 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 FAM71BQ8TC56 605 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 FIG4Q92562 907 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 ANKRD9Q96BM1 317 aaPredicted RBP2.28□□□□□ -2.04
CCDC93-205ENST00000466171 FAM167BQ9BTA0 163 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 CLPBQ9H078 707 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 MVB12BQ9H7P6 319 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 ACAD9Q9H845 621 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 ITM2CQ9NQX7 267 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 ZFP57Q9NU63 452 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 DDX43Q9NXZ2 648 aaKnown RBP2.28□□□□□ -2.04
CCDC93-205ENST00000466171 ZNF224Q9NZL3 707 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 UPB1Q9UBR1 384 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 SIX4Q9UIU6 781 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 POU2F3Q9UKI9 436 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 C19orf53Q9UNZ5 99 aaPredicted RBP2.28□□□□□ -2.04
CCDC93-205ENST00000466171 DGKBQ9Y6T7 804 aa2.28□□□□□ -2.04
CCDC93-205ENST00000466171 A0A0G2JPF8 293 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 TARSL2A2RTX5 802 aaKnown RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 HMX3A6NHT5 357 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 HNRNPCL3B7ZW38 293 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 FAM157AC9JC47 383 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 IPO5O00410 1097 aaKnown RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 HNRNPCL1O60812 293 aaKnown RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 KDM4BO94953 1096 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 CLDN14O95500 239 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 AMBPP02760 352 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ITGA2BP08514 1039 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 HNRNPCL4P0DMR1 293 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 PAX3P23760 479 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 MAPK9P45984 424 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 CLCN3P51790 818 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ZBTB17Q13105 803 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 CAPSQ13938 189 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 SETMARQ53H47 684 aaPredicted RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 RUNDC3AQ59EK9 446 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 FAM69BQ5VUD6 431 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 TBC1D9BQ66K14 1250 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 NAPEPLDQ6IQ20 393 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 CCDC129Q6ZRS4 1044 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 RRAGAQ7L523 313 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 EPHX4Q8IUS5 362 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 DENND6AQ8IWF6 608 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 SUGP1Q8IWZ8 645 aaKnown RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 CACNA2D3Q8IZS8 1091 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 LYG1Q8N1E2 194 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 PTGR2Q8N8N7 351 aaPredicted RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF441Q8N8Z8 693 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 MCPH1Q8NEM0 835 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ZMIZ2Q8NF64 920 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 LNX1Q8TBB1 728 aaPredicted RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 TRAPPC12Q8WVT3 735 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 EVI5LQ96CN4 794 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 RNF183Q96D59 192 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 C3orf30Q96M34 536 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 RTKNQ9BST9 563 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ELAC1Q9H777 363 aaKnown RBP2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ZNF696Q9H7X3 374 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ABCF3Q9NUQ8 709 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 NDUFAF4Q9P032 175 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 SLCO3A1Q9UIG8 710 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 LZTS1Q9Y250 596 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 NOTCH2Q04721 2471 aa2.27□□□□□ -2.05
CCDC93-205ENST00000466171 ATXN2Q99700 1313 aaKnown RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 A0A1W2PS18 150 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 SYT5O00445 386 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 DHX16O60231 1041 aaKnown RBP2.26□□□□□ -2.05
CCDC93-205ENST00000466171 HBP1O60381 514 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 KRT38O76015 456 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 ACTL6BO94805 426 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 LINC00271P0C7V0 271 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 TFPIP10646 304 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 SERPINA4P29622 427 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 FMO5P49326 533 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 HDAC4P56524 1084 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 AP2B1P63010 937 aa2.26□□□□□ -2.05
CCDC93-205ENST00000466171 PPFIA1Q13136 1202 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms