RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 KLHL32Q96NJ5 620 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 TRIM31Q9BZY9 425 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 DPH5Q9H2P9 285 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 MFSD1Q9H3U5 465 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 SUV39H2Q9H5I1 410 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 ANKZF1Q9H8Y5 726 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 LRRC40Q9H9A6 602 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 WHRNQ9P202 907 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 DKK3Q9UBP4 350 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 SHOC2Q9UQ13 582 aa11.24□□□□□ -0.61
VCP-204ENST00000466100 UTP11Q9Y3A2 253 aaKnown RBP11.24□□□□□ -0.61
VCP-204ENST00000466100 TRPM6Q9BX84 2022 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 STK25O00506 426 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 PSMD3O43242 534 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 SPINT1O43278 529 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 USP12O75317 370 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 NDST3O95803 873 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 AGTP01019 485 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 IL1BP01584 269 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 RHOXF2BP0C7M4 288 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 GABRG2P18507 467 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 NDUFV2P19404 249 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ITGB7P26010 798 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ECHS1P30084 290 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 GRIA1P42261 906 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 MAGEA3P43357 314 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 CHRNA4P43681 627 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 PSMD8P48556 350 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 DGKEP52429 567 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ITGA8P53708 1063 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
VCP-204ENST00000466100 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 CDK18Q07002 472 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 MSLNQ13421 630 aaPredicted RBP11.23□□□□□ -0.61
VCP-204ENST00000466100 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 SLC1A5Q15758 541 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 CST6Q15828 149 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 PCSK7Q16549 785 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ZNF805Q5CZA5 627 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ZNF776Q68DI1 518 aaPredicted RBP11.23□□□□□ -0.61
VCP-204ENST00000466100 ZDHHC24Q6UX98 284 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 PARS2Q7L3T8 475 aaKnown RBP11.23□□□□□ -0.61
VCP-204ENST00000466100 BMP8AQ7Z5Y6 402 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 AADATQ8N5Z0 425 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 MCUQ8NE86 351 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 HCAR2Q8TDS4 363 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 MRGPRX1Q96LB2 322 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 TBL1YQ9BQ87 522 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 HINFPQ9BQA5 517 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 RHOXF2Q9BQY4 288 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 FICDQ9BVA6 458 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 HDAC8Q9BY41 377 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 SLC6A17Q9H1V8 727 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ARNT2Q9HBZ2 717 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 CASS4Q9NQ75 786 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 GDF3Q9NR23 364 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ZDHHC18Q9NUE0 388 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 RPL26L1Q9UNX3 145 aaKnown RBP11.23□□□□□ -0.61
VCP-204ENST00000466100 CHKBQ9Y259 395 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 PPIL1Q9Y3C6 166 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 ARIH1Q9Y4X5 557 aaPredicted RBP11.23□□□□□ -0.61
VCP-204ENST00000466100 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 CEP192Q8TEP8 1941 aa11.23□□□□□ -0.61
VCP-204ENST00000466100 TCRBV21S2A2A0A5A6 115 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 E7EVH7 732 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 C1QTNF3-AMACRE9PGA6 284 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 K7ESF4 209 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 KPNA3O00505 521 aaPredicted RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 MID1O15344 667 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 ADH1BP00325 375 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 CPP00450 1065 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 FGF1P05230 155 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 ITIH2P19823 946 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 CA4P22748 312 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 GRIA4P48058 902 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 TERF1P54274 439 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 TUBB4BP68371 445 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 CBLBQ13191 982 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 GALNT3Q14435 633 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 QPCTQ16769 361 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 POM121L1PQ3SYA9 428 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 SIRPB2Q5JXA9 342 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 PIP5KL1Q5T9C9 394 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 NAPEPLDQ6IQ20 393 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 SPAG17Q6Q759 2223 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 PCGF5Q86SE9 256 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 CAND1Q86VP6 1230 aaKnown RBP11.22□□□□□ -0.61
VCP-204ENST00000466100 RASSF3Q86WH2 238 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 TMPRSS6Q8IU80 811 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 TMEM105Q8N8V8 129 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 ART4Q93070 314 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 SMIM14Q96QK8 99 aa11.22□□□□□ -0.61
VCP-204ENST00000466100 HHIPQ96QV1 700 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms