RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TLR10Q9BXR5 811 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 HAUS2Q9NVX0 235 aa20.51■□□□□ 0.87
SKA3-205ENST00000465471 ZFR2Q9UPR6 939 aaKnown RBP20.51■□□□□ 0.87
SKA3-205ENST00000465471 TRPM6Q9BX84 2022 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 A0A1B0GTW7 788 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 A0A1W2PQU0 124 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 UPK3BL1B0FP48 263 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 UPK3BL2E5RIL1 263 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 ZSCAN12O43309 604 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 TSPAN6O43657 245 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 FOXD2O60548 495 aaPredicted RBP20.5■□□□□ 0.87
SKA3-205ENST00000465471 NUDT1P36639 197 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 OTUD4Q01804 1114 aaKnown RBP20.5■□□□□ 0.87
SKA3-205ENST00000465471 DSC2Q02487 901 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 NIPAL4Q0D2K0 466 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 TRAF2Q12933 501 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 RPS6KA1Q15418 735 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 DUOXA1Q1HG43 343 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 ZNF284Q2VY69 593 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 TCEAL6Q6IPX3 200 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 KIAA1161Q6NSJ0 714 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 B4GALNT4Q76KP1 1039 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 TTC7BQ86TV6 843 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 ZC3H18Q86VM9 953 aaKnown RBP20.5■□□□□ 0.87
SKA3-205ENST00000465471 ZSCAN30Q86W11 494 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 ZCCHC9Q8N567 271 aaKnown RBP20.5■□□□□ 0.87
SKA3-205ENST00000465471 TCEAL3Q969E4 200 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 CARD9Q9H257 536 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 GGT7Q9UJ14 662 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 ITM2BQ9Y287 266 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 PCDHGC4Q9Y5F7 938 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 CFAP54Q96N23 3096 aa20.5■□□□□ 0.87
SKA3-205ENST00000465471 A0A1W2PQ67 120 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 BCAT2O15382 392 aaPredicted RBP20.49■□□□□ 0.87
SKA3-205ENST00000465471 MTSS1O43312 755 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 FZD6O60353 706 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 MMP2P08253 660 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 SERPINF2P08697 491 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 GNSP15586 552 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 PTPN3P26045 913 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 WASHC5Q12768 1159 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 SF3A2Q15428 464 aaKnown RBP20.49■□□□□ 0.87
SKA3-205ENST00000465471 TEX44Q53QW1 395 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 SLC45A4Q5BKX6 768 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 TRIM61Q5EBN2 209 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 LRRC73Q5JTD7 316 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 TM9SF3Q9HD45 589 aa20.49■□□□□ 0.87
SKA3-205ENST00000465471 LRRK1Q38SD2 2015 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 LNP1A1A4G5 178 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 PRR5-ARHGAP8B1AHC4 643 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 KHNYNO15037 678 aaKnown RBP20.48■□□□□ 0.87
SKA3-205ENST00000465471 ITIH2P19823 946 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 MMP12P39900 470 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 RPS21P63220 83 aaKnown RBP20.48■□□□□ 0.87
SKA3-205ENST00000465471 ITKQ08881 620 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 ELP6Q0PNE2 266 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 TMEM52BQ4KMG9 183 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 CCDC181Q5TID7 509 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 SEL1L3Q68CR1 1132 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 TADA1Q96BN2 335 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 FEM1CQ96JP0 617 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 TEKT5Q96M29 485 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 CEP41Q9BYV8 373 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 MIR1-1HGQ9H1L0 117 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 PCDH12Q9NPG4 1184 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 SLC6A14Q9UN76 642 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 DMTF1Q9Y222 760 aa20.48■□□□□ 0.87
SKA3-205ENST00000465471 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.48■□□□□ 0.87
SKA3-205ENST00000465471 DMXL1Q9Y485 3027 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 TCRBV7S2A1N4TA0A589 114 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 RIOK3O14730 519 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 NEBLO76041 1014 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 PCDH8O95206 1070 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 PGLSO95336 258 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 MAT2AP31153 395 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 GRIA4P48058 902 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 POLR2LP62875 67 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 RACK1P63244 317 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 IRX4P78413 519 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 FGL2Q14314 439 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 SLC14A2Q15849 920 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 SETMARQ53H47 684 aaPredicted RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 CFAP58Q5T655 872 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 SEL1L2Q5TEA6 688 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 NAPEPLDQ6IQ20 393 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 PRPF39Q86UA1 669 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 TMEM145Q8NBT3 493 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 HTR3CQ8WXA8 447 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 IMP4Q96G21 291 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 SLC6A18Q96N87 628 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 VAT1Q99536 393 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 C1QTNF2Q9BXJ5 285 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 TDRD1Q9BXT4 1180 aaKnown RBP20.47■□□□□ 0.87
SKA3-205ENST00000465471 SEPT10Q9P0V9 454 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 PYCARDQ9ULZ3 195 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 TTLL3Q9Y4R7 772 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 RAI2Q9Y5P3 530 aa20.47■□□□□ 0.87
SKA3-205ENST00000465471 A0A1W2PR77 199 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 GOLGA6L9A6NEM1 432 aa20.46■□□□□ 0.87
SKA3-205ENST00000465471 WNT9AO14904 365 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms