RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ARSIQ5FYB1 569 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 PKN3Q6P5Z2 889 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 TRMT11Q7Z4G4 463 aaKnown RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 ZSWIM9Q86XI8 627 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 TXNDC5Q8NBS9 432 aaKnown RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 OR52K1Q8NGK4 314 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 HCAR2Q8TDS4 363 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 PIH1D2Q8WWB5 315 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 CLDN23Q96B33 292 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 SIGLEC10Q96LC7 697 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 APOL2Q9BQE5 337 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 FICDQ9BVA6 458 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 PHACTR1Q9C0D0 580 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 RSPH9Q9H1X1 276 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 LMAN1LQ9HAT1 526 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 XAB2Q9HCS7 855 aaKnown RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 IL36AQ9UHA7 158 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 SARDHQ9UL12 918 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 RPL26L1Q9UNX3 145 aaKnown RBP14.47□□□□□ -0.09
COL6A1-202ENST00000463060 CHKBQ9Y259 395 aa14.47□□□□□ -0.09
COL6A1-202ENST00000463060 FAM170BA6NMN3 283 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 BNIP3LO60238 219 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 AVILO75366 819 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 HLA-DPA1P20036 260 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 COL9A1P20849 921 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 SERPINA4P29622 427 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 LMAN1P49257 510 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 COPAP53621 1224 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 SARNPP82979 210 aaKnown RBP14.46□□□□□ -0.09
COL6A1-202ENST00000463060 CDH17Q12864 832 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 GAS6Q14393 721 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 HLTFQ14527 1009 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL6A1-202ENST00000463060 QPCTQ16769 361 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 SIRPB2Q5JXA9 342 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 KIAA1211LQ6NV74 962 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 PPP1R21Q6ZMI0 780 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 KDELC2Q7Z4H8 507 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 RELL1Q8IUW5 271 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 RYBPQ8N488 228 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-202ENST00000463060 RPLP0P6Q8NHW5 317 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 OR8D1Q8WZ84 308 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 EDAQ92838 391 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 FMO2Q99518 471 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 WDR83Q9BRX9 315 aaKnown RBP14.46□□□□□ -0.09
COL6A1-202ENST00000463060 OSBPL1AQ9BXW6 950 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 TXLNGYQ9BZA5 131 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 FOXQ1Q9C009 403 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 ZDHHC6Q9H6R6 413 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 DKK3Q9UBP4 350 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 MMP17Q9ULZ9 603 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 PCDHB9Q9Y5E1 797 aa14.46□□□□□ -0.09
COL6A1-202ENST00000463060 A0A1W2PQ67 120 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 ANKRD66B4E2M5 251 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 AP3B1O00203 1094 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 EIF3HO15372 352 aaKnown RBP eCLIP14.45□□□□□ -0.12e-6■■■□□ 15.9
COL6A1-202ENST00000463060 PRNPP04156 253 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 UGT2B4P06133 528 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 ALADP13716 330 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 NPY2RP49146 381 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 METAP1P53582 386 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 LRRC32Q14392 662 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 HIF1AQ16665 826 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 ZNF805Q5CZA5 627 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 CERCAMQ5T4B2 595 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 ARMC12Q5T9G4 340 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 SDE2Q6IQ49 451 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 TMEM92Q6UXU6 159 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 Q6ZS52 159 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 GSPT2Q8IYD1 628 aaKnown RBP14.45□□□□□ -0.1
COL6A1-202ENST00000463060 PIP4K2CQ8TBX8 421 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 AENQ8WTP8 325 aaKnown RBP14.45□□□□□ -0.1
COL6A1-202ENST00000463060 IFT43Q96FT9 208 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 KLHL32Q96NJ5 620 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 FSD1LQ9BXM9 530 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 TSPYL1Q9H0U9 437 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 TBC1D17Q9HA65 648 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 FBRSQ9HAH7 460 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 TEX264Q9Y6I9 313 aa14.45□□□□□ -0.1
COL6A1-202ENST00000463060 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 FGF1P05230 155 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 HOXB2P14652 356 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 TIMP2P16035 220 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 TPH1P17752 444 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 CA4P22748 312 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 SLC8A1P32418 973 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 ARL4CP56559 192 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 SATB1Q01826 763 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 SIGLEC14Q08ET2 396 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 EOGTQ5NDL2 527 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 ARMC3Q5W041 872 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 BRAT1Q6PJG6 821 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 IGDCC3Q8IVU1 814 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 PDIK1LQ8N165 341 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 MPP5Q8N3R9 675 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 PJA1Q8NG27 643 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 OR2T3Q8NH03 318 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 GRIN3AQ8TCU5 1115 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
COL6A1-202ENST00000463060 ARRDC3Q96B67 414 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms