RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 GK5Q6ZS86 529 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 OR6P1Q8NGX9 317 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 CEP70Q8NHQ1 597 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 SOCS4Q8WXH5 440 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 HMCESQ96FZ2 354 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 SUSD3Q96L08 255 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 LRGUKQ96M69 825 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 SLC25A51Q9H1U9 297 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 C6orf203Q9P0P8 240 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 EME2A4GXA9 379 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 AHCYL1O43865 530 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 TADA2AO75478 443 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 GPR15P49685 360 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 DNAJB13P59910 316 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 FOLH1Q04609 750 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 SULT2A1Q06520 285 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 HERC3Q15034 1050 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 TECRLQ5HYJ1 363 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 OGFRL1Q5TC84 451 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 KLC3Q6P597 504 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 ST13P4Q8IZP2 240 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 FAM156AQ8NDB6 213 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 LTA4HP09960 611 aaKnown RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 HAPLN1P10915 354 aaPredicted RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 ME2P23368 584 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 RENBPP51606 427 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 ZNF157P51786 506 aaPredicted RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 DSC2Q02487 901 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 PDK3Q15120 406 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 GPR162Q16538 588 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 MARC1Q5VT66 337 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 KIAA0408Q6ZU52 694 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 CALML6Q8TD86 181 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 FAM192AQ9GZU8 254 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 COPS7BQ9H9Q2 264 aaPredicted RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 SP110Q9HB58 689 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 TNFRSF12AQ9NP84 129 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 ADA2Q9NZK5 511 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 TCAF2A6NFQ2 919 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 A8MT66 165 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 PEX1O43933 1283 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 CNTN5O94779 1100 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 IPO13O94829 963 aaKnown RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 PEX11BO96011 259 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 LPIN1Q14693 890 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 HECTD2Q5U5R9 776 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 RASIP1Q5U651 963 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 FAM219BQ5XKK7 198 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 FBXL19Q6PCT2 694 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 IMP4Q96G21 291 aaKnown RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 DCUN1D1Q96GG9 259 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 MAELQ96JY0 434 aaKnown RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 MRPL1Q9BYD6 325 aaKnown RBP17.05■□□□□ 0.32
ACTB-207ENST00000462494 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 BCAP29Q9UHQ4 241 aa17.05■□□□□ 0.32
ACTB-207ENST00000462494 SCN10AQ9Y5Y9 1956 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 GRK4P32298 578 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 ETFBP38117 255 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 LEPRP48357 1165 aaKnown RBP17.04■□□□□ 0.32
ACTB-207ENST00000462494 TBX4P57082 545 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 PFKPQ01813 784 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 ALFQ53S48 1182 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 CST9Q5W186 159 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 CUZD1Q86UP6 607 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 SPATA24Q86W54 205 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 LRRC49Q8IUZ0 686 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
ACTB-207ENST00000462494 OR13J1Q8NGT2 312 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 GABPB2Q8TAK5 448 aaPredicted RBP17.04■□□□□ 0.32
ACTB-207ENST00000462494 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 GPR152Q8TDT2 470 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 ANKRD49Q8WVL7 239 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.322e-12■■■□□ 16.7
ACTB-207ENST00000462494 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 UROC1Q96N76 676 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 EML4Q9HC35 981 aaKnown RBP17.04■□□□□ 0.32
ACTB-207ENST00000462494 VPS28Q9UK41 221 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 PTPRDP23468 1912 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 NLRC5Q86WI3 1866 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 OR51F1A6NGY5 319 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 TSPAN8P19075 237 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 CLCN5P51795 746 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 C1QTNF8P60827 252 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 EFEMP1Q12805 493 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 PTK2BQ14289 1009 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 DSC3Q14574 896 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 PSMD5Q16401 504 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 PPP1R3AQ16821 1122 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
ACTB-207ENST00000462494 AFAP1L2Q8N4X5 818 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 SNX31Q8N9S9 440 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 STON2Q8WXE9 905 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 HDAC10Q969S8 669 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 TSPAN17Q96FV3 270 aa17.04■□□□□ 0.32
ACTB-207ENST00000462494 ZYG11BQ9C0D3 744 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms