RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 C1QTNF2Q9BXJ5 285 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 TMEM121BQ9BXQ6 578 aaPredicted RBP8.96□□□□□ -0.98
LDB1-203ENST00000461873 MAGEB5Q9BZ81 275 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SLC39A8Q9C0K1 460 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SYNDIG1Q9H7V2 258 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SCUBE2Q9NQ36 999 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 SEPT3Q9UH03 358 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 APOBEC3BQ9UH17 382 aaKnown RBP8.96□□□□□ -0.98
LDB1-203ENST00000461873 LCMT1Q9UIC8 334 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 ITM2BQ9Y287 266 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 CSNK1G3Q9Y6M4 447 aa8.96□□□□□ -0.98
LDB1-203ENST00000461873 CHD8Q9HCK8 2581 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 A0A1W2PQJ5 194 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 TCRBV5S1A1TA0A578 114 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 GOLGA6CA6NDK9 693 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 GOLGA6BA6NDN3 693 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 POM121BA6NF01 834 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 J3KR12 359 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 CACNB4O00305 520 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 PDE2AO00408 941 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 ZW10O43264 779 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 PRAMEF11O60813 436 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 PIGNO95427 931 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 CD160O95971 181 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 TNFP01375 233 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 PCCBP05166 539 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 GP1BAP07359 652 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 ELFN1P0C7U0 828 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 GOLGA6DP0CG33 693 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 CKMT1AP12532 417 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 NME1P15531 152 aaKnown RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 HSPA9P38646 679 aaKnown RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 EIF4A3P38919 411 aaKnown RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 ABL2P42684 1182 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 HCAR3P49019 387 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 PEX5P50542 639 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 ARHGEF7Q14155 803 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 LBRQ14739 615 aaKnown RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 CYTH1Q15438 398 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 SMTNL2Q2TAL5 461 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 PRRT3Q5FWE3 981 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 LRRC73Q5JTD7 316 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 C19orf48Q6RUI8 117 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 ENPP7Q6UWV6 458 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 SRLQ86TD4 932 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 LUZP1Q86V48 1076 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 GKN2Q86XP6 184 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 MAP7D3Q8IWC1 876 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 LSMEM2Q8N112 164 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 SLC25A45Q8N413 288 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 FSTL5Q8N475 847 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 ATPAF2Q8N5M1 289 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 NETO2Q8NC67 525 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 ZNF548Q8NEK5 533 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 HNRNPLLQ8WVV9 542 aaKnown RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 CTNNBL1Q8WYA6 563 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 SYN2Q92777 582 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 NAT6Q93015 286 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 BMFQ96LC9 184 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 APOLD1Q96LR9 279 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 NAP1L5Q96NT1 182 aaPredicted RBP8.95□□□□□ -0.98
LDB1-203ENST00000461873 NRSN2Q9GZP1 204 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 HSD3B7Q9H2F3 369 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 CBX8Q9HC52 389 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.95□□□□□ -0.98
LDB1-203ENST00000461873 WDR70Q9NW82 654 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 UCKL1Q9NWZ5 548 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 KCTD5Q9NXV2 234 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 GOLGA6AQ9NYA3 693 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 MOSPD1Q9UJG1 213 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 ANAPC7Q9UJX3 599 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 ATP8A1Q9Y2Q0 1164 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 RAXQ9Y2V3 346 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 KNTC1P50748 2209 aa8.95□□□□□ -0.98
LDB1-203ENST00000461873 PLXNB3Q9ULL4 1909 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 CHD5Q8TDI0 1954 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 K7ESM1 405 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 DDX3XO00571 662 aaKnown RBP eCLIP8.94□□□□□ -0.98
LDB1-203ENST00000461873 TRIM38O00635 465 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 TPP1O14773 563 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 INSIG1O15503 277 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 DKK1O94907 266 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 RASGRP1O95267 797 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 MT-CO3P00414 261 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 CYP2A6P11509 494 aaPredicted RBP8.94□□□□□ -0.98
LDB1-203ENST00000461873 TIMP2P16035 220 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 CA4P22748 312 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 RBMS1P29558 406 aaKnown RBP8.94□□□□□ -0.98
LDB1-203ENST00000461873 ABCG1P45844 678 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 CSNK1DP48730 415 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 PPM1FP49593 454 aaPredicted RBP8.94□□□□□ -0.98
LDB1-203ENST00000461873 LIG3P49916 1009 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 EPHB1P54762 984 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 ADKP55263 362 aaKnown RBP8.94□□□□□ -0.98
LDB1-203ENST00000461873 CDH6P55285 790 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 AP1S1P61966 158 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 OGDHQ02218 1023 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 NSUN2Q08J23 767 aaKnown RBP eCLIP8.94□□□□□ -0.98
LDB1-203ENST00000461873 PEX6Q13608 980 aa8.94□□□□□ -0.98
LDB1-203ENST00000461873 TRIM14Q14142 442 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms