RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
COPS7B-217ENST00000461350 ARHGEF38Q9NXL2 777 aa11.33□□□□□ -0.6
COPS7B-217ENST00000461350 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
COPS7B-217ENST00000461350 AP4B1Q9Y6B7 739 aa11.33□□□□□ -0.6
COPS7B-217ENST00000461350 CEP290O15078 2479 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 ATP9BO43861 1147 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 PFDN1O60925 122 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 SOD2P04179 222 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 PIM1P11309 404 aaPredicted RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 MGAT1P26572 445 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 INHBCP55103 352 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 FLOT2Q14254 428 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 NADK2Q4G0N4 442 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 SLC9B1Q4ZJI4 515 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 SH2D4BQ5SQS7 431 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 STXBP5Q5T5C0 1151 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 FAM43BQ6ZT52 329 aaPredicted RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 BEND5Q7L4P6 421 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 CMC1Q7Z7K0 106 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 LENG8Q96PV6 779 aaPredicted RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 IL37Q9NZH6 218 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 MPP6Q9NZW5 540 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 CHD9Q3L8U1 2897 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 MYOCOSA0A1B0GUC4 107 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 PDLIM1O00151 329 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 RNF103O00237 685 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 NEMP1O14524 444 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 DNAJA2O60884 412 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 GCATO75600 419 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 TFAP2AP05549 437 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 KLHDC10Q6PID8 442 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 RNF148Q8N7C7 305 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 ZNF781Q8N8C0 355 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 BADQ92934 168 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 SERPINB11Q96P15 392 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 SERPINI1Q99574 410 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 PRPF18Q99633 342 aaKnown RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 NDFIP2Q9NV92 336 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 C6orf203Q9P0P8 240 aaPredicted RBP11.32□□□□□ -0.6
COPS7B-217ENST00000461350 HS3ST4Q9Y661 456 aa11.32□□□□□ -0.6
COPS7B-217ENST00000461350 VILLO15195 856 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 CRTAMO95727 393 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 ERVK-10P10266 1014 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 GLUD2P49448 558 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 TBX4P57082 545 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 SNX32Q86XE0 403 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 MARVELD2Q8N4S9 558 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 EPB41L1Q9H4G0 881 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 COPS7BQ9H9Q2 264 aaPredicted RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 TLR8Q9NR97 1041 aaKnown RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 SPG21Q9NZD8 308 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 VANGL2Q9ULK5 521 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 NEU3Q9UQ49 428 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 PCDHGB5Q9Y5G0 923 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 FAM92AA1XBS5 289 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 ZNF195O14628 629 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 PKNOX1P55347 436 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 RPL26P61254 145 aaKnown RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 CBLBQ13191 982 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 PDK1Q15118 436 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 HSP90AA5PQ58FG0 334 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 PIK3R6Q5UE93 754 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 SPATA17Q96L03 361 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 CDRT15Q96T59 188 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 TCF7L2Q9NQB0 619 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 KCNU1A8MYU2 1149 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 AP1G1O43747 822 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 TLR5O60602 858 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 F7P08709 466 aaPredicted RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 SYN1P17600 705 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 GARSP41250 739 aaKnown RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 HARS2P49590 506 aaKnown RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 NIPAL4Q0D2K0 466 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 SEMA5AQ13591 1074 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 GK3PQ14409 553 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 TMEM259Q4ZIN3 620 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 ARHGAP36Q6ZRI8 547 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 ZNF461Q8TAF7 563 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 ZNF512Q96ME7 567 aaPredicted RBP11.31□□□□□ -0.6
COPS7B-217ENST00000461350 OR52B2Q96RD2 323 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 CDH19Q9H159 772 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 OSBPL2Q9H1P3 480 aa11.31□□□□□ -0.6
COPS7B-217ENST00000461350 IL23AQ9NPF7 189 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms