RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 HNF1BP35680 557 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 RXRGP48443 463 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 CSNK1DP48730 415 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 ARSEP51690 589 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 ZNF75DP51815 510 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 SEMG2Q02383 582 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 RFTN1Q14699 578 aaPredicted RBP18.62■□□□□ 0.57
COL9A2-205ENST00000461118 TCEAL1Q15170 157 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 HES3Q5TGS1 186 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 TMCO3Q6UWJ1 677 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 GDPD4Q6W3E5 623 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 IQCHQ86VS3 1027 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 ZSCAN30Q86W11 494 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 GAS2L3Q86XJ1 694 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 SPATS2Q86XZ4 545 aaKnown RBP18.62■□□□□ 0.57
COL9A2-205ENST00000461118 RHOT2Q8IXI1 618 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 MFSD2AQ8NA29 543 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 SLC39A7Q92504 469 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 AASDHPPTQ9NRN7 309 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 ETNK2Q9NVF9 386 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 DKK3Q9UBP4 350 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 FADS3Q9Y5Q0 445 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 COL27A1Q8IZC6 1860 aaPredicted RBP18.62■□□□□ 0.57
COL9A2-205ENST00000461118 TRPM6Q9BX84 2022 aa18.62■□□□□ 0.57
COL9A2-205ENST00000461118 A0A1W2PQU0 124 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 PRAMEF26H0Y7S4 382 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 DFFAO00273 331 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 UGT2B4P06133 528 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 MAT2AP31153 395 aaKnown RBP18.61■□□□□ 0.57
COL9A2-205ENST00000461118 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 SSR1P43307 286 aaKnown RBP18.61■□□□□ 0.57
COL9A2-205ENST00000461118 CDH6P55285 790 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 NSUN2Q08J23 767 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL9A2-205ENST00000461118 C19orf57Q0VDD7 668 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 OVGP1Q12889 678 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 GRM3Q14832 879 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 ZNF284Q2VY69 593 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 TMEM259Q4ZIN3 620 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 SLC45A4Q5BKX6 768 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 PCSK4Q6UW60 755 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 SNIP1Q8TAD8 396 aaKnown RBP18.61■□□□□ 0.57
COL9A2-205ENST00000461118 HCAR2Q8TDS4 363 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 FEM1CQ96JP0 617 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 KLHL32Q96NJ5 620 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 ERVMER34-1Q9H9K5 563 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 GDF3Q9NR23 364 aa18.61■□□□□ 0.57
COL9A2-205ENST00000461118 IPO11Q9UI26 975 aaKnown RBP18.61■□□□□ 0.57
COL9A2-205ENST00000461118 ZFR2Q9UPR6 939 aaKnown RBP18.61■□□□□ 0.57
COL9A2-205ENST00000461118 ZNF462Q96JM2 2506 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 TLR4O00206 839 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 YKT6O15498 198 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 TSPAN6O43657 245 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 PALMO75781 387 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 PCDH8O95206 1070 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 LCA5LO95447 670 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 KRT7P08729 469 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 KRT81Q14533 505 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 PDK2Q15119 407 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 ATP13A4Q4VNC1 1196 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 KIAA1161Q6NSJ0 714 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 ARHGAP36Q6ZRI8 547 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 CPNE8Q86YQ8 564 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 TP53INP2Q8IXH6 220 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 NETO2Q8NC67 525 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 RFFLQ8WZ73 363 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 ZNF599Q96NL3 588 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 SP110Q9HB58 689 aa18.6■□□□□ 0.57
COL9A2-205ENST00000461118 AREL1O15033 823 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 MAGEC1O60732 1142 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 CD48P09326 243 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 SERPINB6P35237 376 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 ABL2P42684 1182 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 SUOXP51687 545 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 TAS2R40P59535 323 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 RPS21P63220 83 aaKnown RBP18.59■□□□□ 0.57
COL9A2-205ENST00000461118 DPYSL3Q14195 570 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 STAT4Q14765 748 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 TMCO4Q5TGY1 634 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 LRRC49Q8IUZ0 686 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 MAP7D3Q8IWC1 876 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 CCDC170Q8IYT3 715 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 CACTIN-AS1Q8N1I8 211 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 TMEM145Q8NBT3 493 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 TSEN2Q8NCE0 465 aaKnown RBP18.59■□□□□ 0.57
COL9A2-205ENST00000461118 ZNF641Q96N77 438 aaPredicted RBP18.59■□□□□ 0.57
COL9A2-205ENST00000461118 PSKH2Q96QS6 385 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 TUBGCP5Q96RT8 1024 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 AK5Q9Y6K8 562 aa18.59■□□□□ 0.57
COL9A2-205ENST00000461118 TSPAN11A1L157 253 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 SLC31A1O15431 190 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 INSIG1O15503 277 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 MAFKO60675 156 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 PEX11BO96011 259 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 ARRB1P49407 418 aaPredicted RBP18.58■□□□□ 0.56
COL9A2-205ENST00000461118 INSM1Q01101 510 aaPredicted RBP18.58■□□□□ 0.56
COL9A2-205ENST00000461118 MMRN1Q13201 1228 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 ILKQ13418 452 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 MESDQ14696 234 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 PROX2Q3B8N5 592 aa18.58■□□□□ 0.56
COL9A2-205ENST00000461118 SEL1L3Q68CR1 1132 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms