RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TEDDM1Q5T9Z0 273 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 NTAN1Q96AB6 310 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 NXNL1Q96CM4 212 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 PRPF18Q99633 342 aaKnown RBP15.54■□□□□ 0.08
LMNB1-203ENST00000460265 SMPD4Q9NXE4 827 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 SELENONQ9NZV5 590 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 TMEM98Q9Y2Y6 226 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 PCDHB7Q9Y5E2 793 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 PCDHB5Q9Y5E4 795 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 IRAK2O43187 625 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 ALDH2P05091 517 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 YWHAQP27348 245 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 GATMP50440 423 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 LIMK2P53671 638 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 TAF10Q12962 218 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 NFE2Q16621 373 aaPredicted RBP15.54■□□□□ 0.08
LMNB1-203ENST00000460265 PCID2Q5JVF3 399 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 TMC7Q7Z402 723 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 C11orf84Q9BUA3 381 aaPredicted RBP15.54■□□□□ 0.08
LMNB1-203ENST00000460265 GPAMQ9HCL2 828 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 TCF7L2Q9NQB0 619 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 SIRPGQ9P1W8 387 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 USP3Q9Y6I4 520 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 J3KR12 359 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 BIRC5O15392 142 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 TM7SF2O76062 418 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 TFAP2AP05549 437 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 RPL17P18621 184 aaKnown RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 EMP3P54852 163 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 NME5P56597 212 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 DSC2Q02487 901 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 RPS27LQ71UM5 84 aaKnown RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 ARCQ7LC44 396 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 ACMSDQ8TDX5 336 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 USP13Q92995 863 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 SERPINB11Q96P15 392 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 GATA5Q9BWX5 397 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 ITGB1BP2Q9UKP3 347 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 DMTF1Q9Y222 760 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 MGAMO43451 1857 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 CNTN5O94779 1100 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 DDHD2O94830 711 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 STAMBPO95630 424 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 PRKCGP05129 697 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 IDO1P14902 403 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 NSUN2Q08J23 767 aaKnown RBP eCLIP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 PCLAFQ15004 111 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 CCDC153Q494R4 210 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 FBXO48Q5FWF7 155 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 ZSCAN18Q8TBC5 510 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 APBB2Q92870 758 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 PSMG2Q969U7 264 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 TSPAN18Q96SJ8 248 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 ADA2Q9NZK5 511 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 MID2Q9UJV3 735 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 SOX13Q9UN79 622 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 ERI2A8K979 691 aaKnown RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 SUPT7LO94864 414 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 AHSGP02765 367 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 HLA-DQB2P05538 268 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 KRT72Q14CN4 511 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 POLD3Q15054 466 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 RPS6KA2Q15349 733 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 MYLK3Q32MK0 819 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 DNAL1Q4LDG9 190 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 HABP4Q5JVS0 413 aaKnown RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 SEL1L3Q68CR1 1132 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 CMTM5Q96DZ9 223 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 CNBD2Q96M20 576 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 EPB41L1Q9H4G0 881 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 Q9H521 79 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 S100A14Q9HCY8 104 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 FBXO5Q9UKT4 447 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 RGPD3A6NKT7 1758 aaPredicted RBP15.53■□□□□ 0.08
LMNB1-203ENST00000460265 RGPD4Q7Z3J3 1758 aa15.53■□□□□ 0.08
LMNB1-203ENST00000460265 OR51F1A6NGY5 319 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 H3BSA7 217 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 RAMP2O60895 175 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 SIN3BO75182 1162 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 CTGFP29279 349 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 RENBPP51606 427 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 SLC10A7Q0GE19 358 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 TBL3Q12788 808 aaKnown RBP15.52■□□□□ 0.08
LMNB1-203ENST00000460265 SNX31Q8N9S9 440 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 TBCCD1Q9NVR7 557 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 UXTQ9UBK9 157 aaPredicted RBP15.52■□□□□ 0.08
LMNB1-203ENST00000460265 TMED5Q9Y3A6 229 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 ATP6AP2A0A1C7CYW4 349 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 PQBP1O60828 265 aaKnown RBP15.52■□□□□ 0.08
LMNB1-203ENST00000460265 AOC2O75106 756 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 ATP6AP2O75787 350 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 CCL23P55773 120 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 HNRNPDQ14103 355 aaKnown RBP15.52■□□□□ 0.08
LMNB1-203ENST00000460265 PKN3Q6P5Z2 889 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 ZNF276Q8N554 614 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 SKA1Q96BD8 255 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 AK5Q9Y6K8 562 aa15.52■□□□□ 0.08
LMNB1-203ENST00000460265 PSMD3O43242 534 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms