RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 PTPN9P43378 593 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
SRRT-206ENST00000460194 CCL7P80098 99 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 ZFP36L1Q07352 338 aaKnown RBP13.35□□□□□ -0.27
SRRT-206ENST00000460194 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
SRRT-206ENST00000460194 TGIF1Q15583 401 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 INO80DQ53TQ3 878 aaPredicted RBP13.35□□□□□ -0.27
SRRT-206ENST00000460194 FAXCQ5TGI0 409 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 NAA35Q5VZE5 725 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 OGFOD3Q6PK18 319 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 SDR16C5Q8N3Y7 309 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 FSTL5Q8N475 847 aaPredicted RBP13.35□□□□□ -0.27
SRRT-206ENST00000460194 KYQ8NBH2 561 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 NETO2Q8NC67 525 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 GPR156Q8NFN8 814 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 PCDH19Q8TAB3 1148 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 GPT2Q8TD30 523 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 GLMNQ92990 594 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 CCDC74AQ96AQ1 378 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 STK33Q9BYT3 514 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 CPEB1Q9BZB8 566 aaKnown RBP13.35□□□□□ -0.27
SRRT-206ENST00000460194 EDEM3Q9BZQ6 932 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 CLMPQ9H6B4 373 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 LHX3Q9UBR4 397 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 FLNCQ14315 2725 aa13.35□□□□□ -0.27
SRRT-206ENST00000460194 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 RAMP2O60895 175 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 WISP1O95388 367 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 GJB6O95452 261 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 GSCP56915 257 aaPredicted RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 FMO1Q01740 532 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 CYTH1Q15438 398 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 CAMK4Q16566 473 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 ESRP1Q6NXG1 681 aaKnown RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 FOXR1Q6PIV2 292 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 RAB11FIP2Q7L804 512 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 TMPRSS9Q7Z410 1059 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 SFTPA2Q8IWL1 248 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 PYROXD2Q8N2H3 581 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 RYBPQ8N488 228 aaPredicted RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 HCAR2Q8TDS4 363 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 SLC20A1Q8WUM9 679 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 TSACCQ96A04 125 aaPredicted RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 NTAN1Q96AB6 310 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 TBC1D31Q96DN5 1066 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 WRAP53Q9BUR4 548 aaKnown RBP13.34□□□□□ -0.27
SRRT-206ENST00000460194 FOXP3Q9BZS1 431 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 GANQ9H2C0 597 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 STARD5Q9NSY2 213 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 APPL1Q9UKG1 709 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 COQ6Q9Y2Z9 468 aa13.34□□□□□ -0.27
SRRT-206ENST00000460194 TCRBV5S1A1TA0A578 114 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 ZSCAN5CA6NGD5 496 aaPredicted RBP13.33□□□□□ -0.28
SRRT-206ENST00000460194 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 WASH4PA8MWX3 477 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.28
SRRT-206ENST00000460194 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.28
SRRT-206ENST00000460194 HGFP14210 728 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 BLKP51451 505 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 SUOXP51687 545 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 NFATC4Q14934 902 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 LRRC14Q15048 493 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 ELOCQ15369 112 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 UGP2Q16851 508 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 CDO1Q16878 200 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 RWDD4Q6NW29 188 aaKnown RBP13.33□□□□□ -0.28
SRRT-206ENST00000460194 DTX1Q86Y01 620 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 RTL3Q8N8U3 475 aaKnown RBP13.33□□□□□ -0.28
SRRT-206ENST00000460194 CXorf40AQ8TE69 158 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 CASKIN2Q8WXE0 1202 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 GDAP1L1Q96MZ0 367 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 GFM1Q96RP9 751 aaKnown RBP13.33□□□□□ -0.28
SRRT-206ENST00000460194 RBM15Q96T37 977 aaKnown RBP eCLIP13.33□□□□□ -0.283e-8■□□□□ 10.5
SRRT-206ENST00000460194 APOOQ9BUR5 198 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 PDFQ9HBH1 243 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 HPCAL4Q9UM19 191 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 DGKBQ9Y6T7 804 aa13.33□□□□□ -0.28
SRRT-206ENST00000460194 BUB1O43683 1085 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 SLC28A2O43868 658 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 BUB1BO60566 1050 aaPredicted RBP13.32□□□□□ -0.28
SRRT-206ENST00000460194 RPLP0P05388 317 aaKnown RBP13.32□□□□□ -0.28
SRRT-206ENST00000460194 ALPIP09923 528 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 GM2AP17900 193 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 WT1P19544 449 aaPredicted RBP13.32□□□□□ -0.28
SRRT-206ENST00000460194 SDC4P31431 198 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 RFC1P35251 1148 aaPredicted RBP13.32□□□□□ -0.28
SRRT-206ENST00000460194 JAM2P57087 298 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 SRP54P61011 504 aaKnown RBP13.32□□□□□ -0.28
SRRT-206ENST00000460194 CDR2Q01850 454 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 KCNC4Q03721 635 aa13.32□□□□□ -0.28
SRRT-206ENST00000460194 SERINC3Q13530 473 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms