RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 IL4RP24394 825 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 MAN1A1P33908 653 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
COL7A1-203ENST00000459756 ARSEP51690 589 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 AP1S1P61966 158 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 SLC10A7Q0GE19 358 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 TBX2Q13207 712 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-203ENST00000459756 ERAP2Q6P179 960 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 LRRC49Q8IUZ0 686 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 ATPAF2Q8N5M1 289 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 GATA6Q92908 595 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 CENPTQ96BT3 561 aa16.27■□□□□ 0.2
COL7A1-203ENST00000459756 CNDP2Q96KP4 475 aaKnown RBP16.27■□□□□ 0.2
COL7A1-203ENST00000459756 WRAP53Q9BUR4 548 aaKnown RBP16.27■□□□□ 0.2
COL7A1-203ENST00000459756 SPTY2D1-AS1A0A0U1RR47 76 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ENC1O14682 589 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 MUSKO15146 869 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 MAFKO60675 156 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 SDC3O75056 442 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 PEX11BO96011 259 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 PROS1P07225 676 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 CD48P09326 243 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ITIH2P19823 946 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 GJC1P36383 396 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 SCNN1BP51168 640 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 POLR2LP62875 67 aaKnown RBP16.26■□□□□ 0.19
COL7A1-203ENST00000459756 BCL2L1Q07817 233 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 MMRN1Q13201 1228 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 DPYSL3Q14195 570 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ZNF235Q14590 738 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 PDK2Q15119 407 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 MAP7D3Q8IWC1 876 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 KCTD6Q8NC69 237 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ECHDC3Q96DC8 303 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ZNF670Q9BS34 389 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 PCDH12Q9NPG4 1184 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 SPTLC3Q9NUV7 552 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ATP8A1Q9Y2Q0 1164 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 PCDHGA1Q9Y5H4 931 aa16.26■□□□□ 0.19
COL7A1-203ENST00000459756 ANKRD36A6QL64 1941 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-203ENST00000459756 TMEM8BA6NDV4 472 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 C1QTNF9BB2RNN3 333 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
COL7A1-203ENST00000459756 C1SP09871 688 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 C1QTNF9P0C862 333 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 DGKAP23743 735 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 MMP12P39900 470 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 ARHGAP25P42331 645 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 TAS2R40P59535 323 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 PFN3P60673 137 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 FZD2Q14332 565 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 ST3GAL2Q16842 350 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 PARGQ86W56 976 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 ZSWIM9Q86XI8 627 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 CPNE8Q86YQ8 564 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 RHOT2Q8IXI1 618 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 SLC25A45Q8N413 288 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 SLC35G2Q8TBE7 412 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 TMEM121BQ9BXQ6 578 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-203ENST00000459756 DNAJC28Q9NX36 388 aa16.25■□□□□ 0.19
COL7A1-203ENST00000459756 CFAP69A5D8W1 941 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 TOR1BO14657 336 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PIAS2O75928 621 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 MTA2O94776 668 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 CDK4P11802 303 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 NME1P15531 152 aaKnown RBP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 HNRNPKP61978 463 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 YPEL5P62699 121 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 ZNF211Q13398 564 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PDE1CQ14123 709 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PTK2BQ14289 1009 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 MESDQ14696 234 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PAFAH1B3Q15102 231 aaKnown RBP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 ATP13A4Q4VNC1 1196 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 ANKRD20A8PQ5CZ79 823 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 RALGPS1Q5JS13 557 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 CCNI2Q6ZMN8 369 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 TMPRSS7Q7RTY8 843 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 GALNT15Q8N3T1 639 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PAF1Q8N7H5 531 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PCDH19Q8TAB3 1148 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 SPOCK2Q92563 424 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 NUDCD1Q96RS6 583 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 MGME1Q9BQP7 344 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 INTUQ9ULD6 942 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 ARID1BQ8NFD5 2236 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-203ENST00000459756 PTPRBP23467 1997 aa16.24■□□□□ 0.19
COL7A1-203ENST00000459756 WDFY3Q8IZQ1 3526 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 USP24Q9UPU5 2620 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 KMT2BQ9UMN6 2715 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-203ENST00000459756 A0A1W2PQ67 120 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 NEMP2A6NFY4 417 aa16.23■□□□□ 0.19
COL7A1-203ENST00000459756 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms