RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 HPS1Q92902 700 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 RAD51AP1Q96B01 352 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 CHFRQ96EP1 664 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 CNDP1Q96KN2 507 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 B3GALT6Q96L58 329 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 KREMEN1Q96MU8 473 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 GCOM2Q9BZD3 368 aaPredicted RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 TIGARQ9NQ88 270 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 FAM105AQ9NUU6 356 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 PTBP2Q9UKA9 531 aaKnown RBP6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 APPL1Q9UKG1 709 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 DERAQ9Y315 318 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 GPSM3Q9Y4H4 160 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 AP4S1Q9Y587 144 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 ACTL7BQ9Y614 415 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 CPQQ9Y646 472 aa6.9□□□□□ -1.3
CUBNP3-201ENST00000457461 CEP350Q5VT06 3117 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CCDC188H7C350 402 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CCRL2O00421 344 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 RASGRF2O14827 1237 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 KCNN4O15554 427 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 MSI1O43347 362 aaKnown RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 SRGAP2O75044 1071 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 NOS1APO75052 506 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 SERPINI2O75830 405 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 KRT36O76013 467 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CCNDBP1O95273 360 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 BMP10O95393 424 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ATP5BP06576 529 aaKnown RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ASGR1P07306 291 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CKBP12277 381 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 EPHB2P29323 1055 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ECHS1P30084 290 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CRYBB1P53674 252 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 DRG2P55039 364 aaKnown RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 DCDC1P59894 354 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ACTR3P61158 418 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TSPAN5P62079 268 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 HTRA3P83110 453 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF200P98182 395 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 PTPN11Q06124 597 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ERV3-1Q14264 604 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CDK10Q15131 360 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 KIZQ2M2Z5 673 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 DCAF4L1Q3SXM0 396 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 MMEL1Q495T6 779 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 INO80DQ53TQ3 878 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 RTP2Q5QGT7 225 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 PIK3R6Q5UE93 754 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TPGS2Q68CL5 300 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 PLEKHA7Q6IQ23 1121 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TTC27Q6P3X3 843 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CXCL17Q6UXB2 119 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 UNC5AQ6ZN44 842 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF571Q7Z3V5 609 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TMC3Q7Z5M5 1100 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 ZBTB33Q86T24 672 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 SERINC5Q86VE9 423 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 LACC1Q8IV20 430 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM71AQ8IYT1 594 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 C7orf31Q8N865 590 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 OR6C4Q8NGE1 309 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 OR5B17Q8NGF7 314 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 OR6P1Q8NGX9 317 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TBC1D15Q8TC07 691 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 HM13Q8TCT9 377 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM172AQ8WUF8 416 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 DNAJB3Q8WWF6 145 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CAPSLQ8WWF8 208 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 JADE3Q92613 823 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 FOXJ1Q92949 421 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CAPZA3Q96KX2 299 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TMEM68Q96MH6 324 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TOX2Q96NM4 488 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 NT5C1BQ96P26 610 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 PRMT1Q99873 361 aaKnown RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TMEM79Q9BSE2 394 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TRAF4Q9BUZ4 470 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 FAM49AQ9H0Q0 323 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 SLC6A15Q9H2J7 730 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 SLITRK6Q9H5Y7 841 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TRIM45Q9H8W5 580 aaPredicted RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 CDHR5Q9HBB8 845 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 PCOLCE2Q9UKZ9 415 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TRIM33Q9UPN9 1127 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 NOC2LQ9Y3T9 749 aaKnown RBP6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 MAU2Q9Y6X3 613 aa6.9□□□□□ -1.31
CUBNP3-201ENST00000457461 MN1Q10571 1320 aaPredicted RBP6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 HEATR9A2RTY3 570 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 RCCD1A6NED2 376 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 CAPN8A6NHC0 703 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 ARGFXA6NJG6 315 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 A8MX80 341 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 ZNF487B1APH4 448 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 TARM1B6A8C7 271 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 TAF4O00268 1085 aa6.89□□□□□ -1.31
CUBNP3-201ENST00000457461 PLK4O00444 970 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms