RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CEP250Q9BV73 2442 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 PLXNA2O75051 1894 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3DA0A087WVF3 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3IA0A087WXS9 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3EA0A087X179 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3KA0A087X1G2 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TSPAN11A1L157 253 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 BCLAF3A2AJT9 711 aaKnown RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 GOLGA6L9A6NEM1 432 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3FA6NER0 549 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 LRRC72A6NJI9 287 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3LB9A6J9 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 KCNK3O14649 394 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 ENC1O14682 589 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 HTRA2O43464 458 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 IGHV4-34P06331 123 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 RETP07949 1114 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3HP0C7X1 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 RBP3P10745 1247 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 ADRB3P13945 408 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 CES1P23141 567 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 ITPKAP23677 461 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 PTPN3P26045 913 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 RBL1P28749 1068 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 MAPK8P45983 427 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 DHPSP49366 369 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 NEK3P51956 506 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 BCL2L1Q07817 233 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 NIPAL4Q0D2K0 466 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 SLC45A4Q5BKX6 768 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3GQ6DHY5 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3CQ6IPX1 549 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 FBXL19Q6PCT2 694 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 PARS2Q7L3T8 475 aaKnown RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TTC7BQ86TV6 843 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 ZSWIM9Q86XI8 627 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TBC1D3Q8IZP1 549 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 OR2T34Q8NGX1 318 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 C1orf216Q8TAB5 229 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 FOXJ1Q92949 421 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TEKT5Q96M29 485 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 QKIQ96PU8 341 aaKnown RBP eCLIP10.15□□□□□ -0.785e-8■■■■■ 36.1
ATG4A-206ENST00000457035 SEMA3CQ99985 751 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 FAM118BQ9BPY3 351 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 ORAI3Q9BRQ5 295 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 POLR1EQ9GZS1 481 aaKnown RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 ATP13A3Q9H7F0 1226 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 EBF2Q9HAK2 575 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 USP29Q9HBJ7 922 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 DYRK4Q9NR20 520 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 TMEM74BQ9NUR3 256 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 R3HDM2Q9Y2K5 976 aaKnown RBP10.15□□□□□ -0.78
ATG4A-206ENST00000457035 PCDHGC4Q9Y5F7 938 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 FADS3Q9Y5Q0 445 aa10.15□□□□□ -0.78
ATG4A-206ENST00000457035 CNOT1A5YKK6 2376 aaKnown RBP10.15□□□□□ -0.79
ATG4A-206ENST00000457035 ARID1BQ8NFD5 2236 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-206ENST00000457035 FAM47DPA6NHR8 397 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 H7C0C1 242 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 AREL1O15033 823 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 SPINT1O43278 529 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 MTSS1O43312 755 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 AP1G1O43747 822 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 KIF5CO60282 957 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 FZD6O60353 706 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 EPN2O95208 641 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 MMP2P08253 660 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 ITIH2P19823 946 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 TGM1P22735 817 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 MAOBP27338 520 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 SERPINA4P29622 427 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 CXCR5P32302 372 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 CD68P34810 354 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-206ENST00000457035 ABL2P42684 1182 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 ATP5OP48047 213 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 CCR5P51681 352 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 EIF3EP60228 445 aaKnown RBP10.14□□□□□ -0.79
ATG4A-206ENST00000457035 DSC2Q02487 901 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 ITKQ08881 620 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 TRAF2Q12933 501 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 SIX1Q15475 284 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-206ENST00000457035 UGP2Q16851 508 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 SEL1L2Q5TEA6 688 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 PEAR1Q5VY43 1037 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-206ENST00000457035 KIAA0895LQ68EN5 471 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 NEK5Q6P3R8 708 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 BRAT1Q6PJG6 821 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 SLC35B2Q8TB61 432 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 HTR3CQ8WXA8 447 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 RAB7BQ96AH8 199 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 BIRC7Q96CA5 298 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 HSPA12BQ96MM6 686 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 CEP41Q9BYV8 373 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 ARRDC1-AS1Q9H2J1 176 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 SEPT10Q9P0V9 454 aa10.14□□□□□ -0.79
ATG4A-206ENST00000457035 PILRBQ9UKJ0 227 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms