RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 MGME1Q9BQP7 344 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RASSF1Q9NS23 344 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GABBR1Q9UBS5 961 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 LOC102724428A0A0B4J2F2 783 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 AQP12BA6NM10 295 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF879B4DU55 563 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PI4K2BG5E9Z4 385 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 FCHO1O14526 889 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GRID2O43424 1007 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 FTH1P02794 183 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ENO2P09104 434 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ALDH4A1P30038 563 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SIK1P57059 783 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SP4Q02446 784 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 BST2Q10589 180 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF284Q2VY69 593 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZRANB3Q5FWF4 1079 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ANGEL2Q5VTE6 544 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SERPINA13PQ6UXR4 307 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 AQP12AQ8IXF9 295 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 OTUD7AQ8TE49 926 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 NDNQ99608 321 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CORO1BQ9BR76 489 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ELOVL4Q9GZR5 314 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 AFF4Q9UHB7 1163 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 EML1O00423 815 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM127O75204 238 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SCELO95171 688 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 RAG1P15918 1043 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CWF19L1Q69YN2 538 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PIGSQ96S52 555 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CPNE5Q9HCH3 593 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DCP1AQ9NPI6 582 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TIAM2Q8IVF5 1701 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 FAM240BA0A1B0GVZ2 78 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GRXCR2A6NFK2 248 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L5A8MUK1 530 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 RGS10O43665 173 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CRTAPO75718 401 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 YWHAQP27348 245 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CTBP2P56545 445 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 YWHAZP63104 245 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SLC13A2Q13183 592 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 INTS6LQ5JSJ4 861 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 METTL2BQ6P1Q9 378 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 YME1L1Q96TA2 773 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CDC6Q99741 560 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 LRRC4BQ9NT99 713 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PLEKHA6Q9Y2H5 1048 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 IRS2Q9Y4H2 1338 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 USP17L10C9JJH3 530 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ATP6V1B2P21281 511 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GRIK3Q13003 919 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PKP1Q13835 747 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 COQ5Q5HYK3 327 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM159Q96B96 161 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM47Q9BQJ4 181 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 C2orf49Q9BVC5 232 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HIPK3Q9H422 1215 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SPASTQ9UBP0 616 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SLC39A10Q9ULF5 831 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PCDHA6Q9UN73 950 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 INPP5FQ9Y2H2 1132 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SIK3Q9Y2K2 1263 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PCDHA8Q9Y5H6 950 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZC3H4Q9UPT8 1303 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 PHF3Q92576 2039 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DDX3XO00571 662 aaKnown RBP eCLIP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DPYSL4O14531 572 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 FAM20BO75063 409 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 LYPLA1O75608 230 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GH2P01242 217 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 STAG3L1P0CL83 205 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DARSP14868 501 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TAF6P49848 677 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GABARAPL2P60520 117 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ADAM8P78325 824 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF169Q14929 603 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 NR6A1Q15406 480 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SEC23BQ15437 767 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CCDC58Q4VC31 144 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GPR158Q5T848 1215 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 IRAK1BP1Q5VVH5 260 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 MFSD14CQ5VZR4 134 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CHERPQ8IWX8 916 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 ZFPM1Q8IX07 1006 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 AURKBQ96GD4 344 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 HPDLQ96IR7 371 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 GTPBP2Q9BX10 602 aaKnown RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DOCK3Q8IZD9 2030 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 CLCA1A8K7I4 914 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 SUV39H1O43463 412 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 FAM189A1O60320 539 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 KAT7O95251 611 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 IL5RAQ01344 420 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 C15orf59Q2T9L4 293 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-204ENST00000455883 DENND5BQ6ZUT9 1274 aa5.24□□□□□ -1.57
CSMD3-204ENST00000455883 TAF8Q7Z7C8 310 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms