RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SH3GLB1Q9Y371 365 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 PTGDR2Q9Y5Y4 395 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 KIAA1217Q5T5P2 1943 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 LRRC14BA6NHZ5 514 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.26□□□□□ -0.61
DDR1-240ENST00000454612 TOMM70O94826 608 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 CTPS1P17812 591 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 XRCC1P18887 633 aaPredicted RBP11.26□□□□□ -0.61
DDR1-240ENST00000454612 PROZP22891 400 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 YWHAQP27348 245 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 DUSP4Q13115 394 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 MARCH8Q5T0T0 291 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 MYO1HQ8N1T3 1032 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 PTGR2Q8N8N7 351 aaPredicted RBP11.26□□□□□ -0.61
DDR1-240ENST00000454612 HEXDCQ8WVB3 486 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 VPS50Q96JG6 964 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 CCT7Q99832 543 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 FAM192AQ9GZU8 254 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 IL22Q9GZX6 179 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 CDH19Q9H159 772 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 RNF112Q9ULX5 631 aa11.26□□□□□ -0.61
DDR1-240ENST00000454612 FAM159BA6NKW6 160 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 GPR182O15218 404 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 RAMP2O60895 175 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CNTN5O94779 1100 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 AP2A1O95782 977 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 PRSS56P0CW18 603 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ALOX15P16050 662 aaPredicted RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 RGS2P41220 211 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ALDH1A3P47895 512 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CCL23P55773 120 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 SLC10A7Q0GE19 358 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 DHDDSQ86SQ9 333 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 LINC00523Q86TU6 105 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 DSELQ8IZU8 1212 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 NRG4Q8WWG1 115 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 RBBP8Q99708 897 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CIB1Q99828 191 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 EFHD1Q9BUP0 239 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 HPS4Q9NQG7 708 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 GMIPQ9P107 970 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 PCDHGC4Q9Y5F7 938 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 TRIM43BA6NCK2 446 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 FFAR3O14843 346 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 GPR42O15529 346 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 DAB1O75553 588 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 EEF1DP29692 281 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 SREBF2Q12772 1141 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 DLG1Q12959 904 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 DCTN2Q13561 401 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 PPP1R3AQ16821 1122 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ZNF789Q5FWF6 425 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 MTX3Q5HYI7 312 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 C16orf89Q6UX73 402 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ZNF598Q86UK7 904 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 CARNMT1Q8N4J0 409 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 OR7D4Q8NG98 312 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ULK4Q96C45 1275 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 TBCDQ9BTW9 1192 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 GPR63Q9BZJ6 419 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 MTMR10Q9NXD2 777 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 MARCH2Q9P0N8 246 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 TMCO1Q9UM00 188 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 HACD1B0YJ81 288 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 E7ESA3 106 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 MRASO14807 208 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 TIPRLO75663 272 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 GJB3O75712 270 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 FGF3P11487 239 aaPredicted RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 CD1EP15812 388 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 TPSB2P20231 275 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ETV4P43268 484 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CRYBB1P53674 252 aaPredicted RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 MTTPP55157 894 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CCDC15Q0P6D6 951 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 INCA1Q0VD86 236 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 PRKAA1Q13131 559 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 TPSAB1Q15661 275 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CCDC153Q494R4 210 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 CACUL1Q86Y37 369 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 RASAL3Q86YV0 1011 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 GTF3C2Q8WUA4 911 aaPredicted RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 C7orf26Q96N11 449 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 HNRNPABQ99729 332 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 GLOD4Q9HC38 313 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 EURLQ9NYK6 297 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
DDR1-240ENST00000454612 ASB3Q9Y575 518 aa11.25□□□□□ -0.61
DDR1-240ENST00000454612 ZBTB14O43829 449 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 FBXO21O94952 628 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 ME2P23368 584 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 SLC1A2P43004 574 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 THOP1P52888 689 aa11.24□□□□□ -0.61
DDR1-240ENST00000454612 CDC16Q13042 620 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms