RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PTRH1Q86Y79 214 aaKnown RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LURAP1LQ8IV03 231 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCNJLQ8IV13 435 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FAM71AQ8IYT1 594 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FBXO39Q8N4B4 442 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RCBTB1Q8NDN9 531 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DENND6BQ8NEG7 585 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZNF397Q8NF99 534 aaPredicted RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EPS8L1Q8TE68 723 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CXorf40AQ8TE69 158 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PTCD2Q8WV60 388 aaKnown RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SNRNP27Q8WVK2 155 aaKnown RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PATE1Q8WXA2 126 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 OR1E3Q8WZA6 343 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NAT6Q93015 286 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NT5C3BQ969T7 300 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 IFT43Q96FT9 208 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HMCESQ96FZ2 354 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FEM1CQ96JP0 617 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NSMCE3Q96MG7 304 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TIGD1Q96MW7 591 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GDAP1L1Q96MZ0 367 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NCAPGQ9BPX3 1015 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NUDT22Q9BRQ3 303 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FAM117AQ9C073 453 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NOL6Q9H6R4 1146 aaKnown RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 USP29Q9HBJ7 922 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PCDH12Q9NPG4 1184 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EVA1BQ9NVM1 165 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GPATCH2LQ9NWQ4 482 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LHX3Q9UBR4 397 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 KLQ9UEF7 1012 aa6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HOOK1Q9UJC3 728 aaKnown RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HEMK1Q9Y5R4 338 aaPredicted RBP6.06□□□□□ -1.44
HLA-DPA3-207ENST00000454398 A0A0U1RQS6 177 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TTC24A2A3L6 582 aaPredicted RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMEM202A6NGA9 273 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 A8MX80 341 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C9orf172C9J069 976 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 F8VZ95 297 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NTN3O00634 580 aaPredicted RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TERTO14746 1132 aaKnown RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EPHB6O15197 1021 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TM7SF2O76062 418 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GFPT2O94808 682 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GNA14O95837 355 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GSRP00390 522 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCL4P13236 92 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TIMP2P16035 220 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ITGB6P18564 788 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MPSTP25325 297 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ETFBP38117 255 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MMP12P39900 470 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RPIAP49247 311 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ARSDP51689 593 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HK3P52790 923 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HDAC4P56524 1084 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SRSF1Q07955 248 aaKnown RBP eCLIP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 INPP5AQ14642 412 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C16orf72Q14CZ0 275 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 POLD3Q15054 466 aaPredicted RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PTPRRQ15256 657 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MYLK3Q32MK0 819 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ARL13BQ3SXY8 428 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC14Q49A88 953 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MIIPQ5JXC2 388 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ESRP1Q6NXG1 681 aaKnown RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FOXR2Q6PJQ5 311 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 IGF2-ASQ6U949 168 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ENPP7Q6UWV6 458 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GDPD4Q6W3E5 623 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 USP53Q70EK8 1073 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SPRED1Q7Z699 444 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TTC7BQ86TV6 843 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZNF761Q86XN6 746 aaPredicted RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMEM35BQ8NCS4 154 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FNIP1Q8TF40 1166 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FAM172AQ8WUF8 416 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RXFP2Q8WXD0 754 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C18orf8Q96DM3 657 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TBC1D31Q96DN5 1066 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PGAP3Q96FM1 320 aaPredicted RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 LIN37Q96GY3 246 aaPredicted RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CELF6Q96J87 481 aaKnown RBP6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ARHGAP9Q9BRR9 750 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FUCA2Q9BTY2 467 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMEM168Q9H0V1 697 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SEMA6CQ9H3T2 930 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TAB2Q9NYJ8 693 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 OR12D3Q9UGF7 316 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RWDD2AQ9UIY3 292 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SALL4Q9UJQ4 1053 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMEM59LQ9UK28 342 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DAAM1Q9Y4D1 1078 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HS3ST3A1Q9Y663 406 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CSNK1G3Q9Y6M4 447 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RNF215Q9Y6U7 377 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ICE1Q9Y2F5 2266 aa6.05□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TPP1O14773 563 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms