RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ANXA2P2A6NMY6 339 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 SLC38A8A6NNN8 435 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 TBKBP1A7MCY6 615 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM90A22PA8MWA6 464 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM90A12PA8MX19 464 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM90A23PA8MXZ1 464 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 H0YIN7 160 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ACOT7O00154 380 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 HGSO14964 777 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ATP2A1O14983 1001 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 EIF3DO15371 548 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CUTAO60888 179 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PPP1R11O60927 126 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 AVILO75366 819 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 RASAL1O95294 804 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 KLKB1P03952 638 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 GBAP04062 536 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZFYP08048 801 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FBLN1P23142 703 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 MYF6P23409 242 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CD6P30203 668 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CCND2P30279 289 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CPOXP36551 454 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 LONP1P36776 959 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PEX5P50542 639 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 METAP1P53582 386 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 NCKAP1LP55160 1127 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 TFAP4Q01664 338 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 NIPAL4Q0D2K0 466 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 GRSF1Q12849 480 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 OVGP1Q12889 678 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 SCGB2A2Q13296 93 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 MTM1Q13496 603 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 GRAPQ13588 217 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 TSTA3Q13630 321 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 RCN1Q15293 331 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FUT11Q495W5 492 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CFAP221Q4G0U5 840 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PLA1AQ53H76 456 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FASTKD1Q53R41 847 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 MDH1BQ5I0G3 518 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 EMC4Q5J8M3 183 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 UBAP2Q5T6F2 1119 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 FAM171A1Q5VUB5 890 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ARHGAP17Q68EM7 881 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABLIM2Q6H8Q1 611 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 GRAMD4Q6IC98 578 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 DPY19L2P1Q6NXN4 242 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PAPD4Q6PIY7 484 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 OLFML1Q6UWY5 402 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PARS2Q7L3T8 475 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 GPRIN1Q7Z2K8 1008 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 HAUS6Q7Z4H7 955 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 KCTD20Q7Z5Y7 419 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CAMKMTQ7Z624 323 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 MTERF4Q7Z6M4 381 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CAND1Q86VP6 1230 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPATA24Q86W54 205 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PSTKQ8IV42 348 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 DHX40Q8IX18 779 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 AADATQ8N5Z0 425 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF321PQ8N8H1 164 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CADM4Q8NFZ8 388 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR7G3Q8NG95 312 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 OR8K5Q8NH50 307 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 WDR48Q8TAF3 677 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PHOSPHO1Q8TCT1 267 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 MIPOL1Q8TD10 442 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZNF480Q8WV37 535 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 SNX33Q8WV41 574 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 CLEC4DQ8WXI8 215 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 IP6K1Q92551 441 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 C5orf30Q96GV9 206 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 MASTLQ96GX5 879 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRICKLE1Q96MT3 831 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 SPATA13Q96N96 652 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 HNRNPABQ99729 332 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 B3GNT4Q9C0J1 378 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 BCO1Q9HAY6 547 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 TLR8Q9NR97 1041 aaKnown RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 SMPD3Q9NY59 655 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 KCMF1Q9P0J7 381 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 BTBD7Q9P203 1132 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 ASH2LQ9UBL3 628 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 GMEB2Q9UKD1 530 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 NUDT5Q9UKK9 219 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 RIMKLBQ9ULI2 386 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 OSGIN2Q9Y236 505 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 DLGAP4Q9Y2H0 992 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 TEX264Q9Y6I9 313 aa4.51□□□□□ -1.69
HMGB3P21-201ENST00000452483 A0A1W2PQM1 296 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 PRSS29PA6NIE9 313 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 ZSCAN5BA6NJL1 495 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 VGLL3A8MV65 326 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 M0QYG6 137 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 SOCS6O14544 535 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 LDLRAD4O15165 306 aa4.5□□□□□ -1.69
HMGB3P21-201ENST00000452483 CASC3O15234 703 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms