RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 BDNFP23560 247 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 PTGER1P34995 402 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 CBSP35520 551 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 ARL3P36405 182 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 THPOP40225 353 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 MLH1P40692 756 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 DRG2P55039 364 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 ARF3P61204 181 aaPredicted RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 ARF1P84077 181 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 EIF4A2Q14240 407 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 FGFBP1Q14512 234 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 LPIN1Q14693 890 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 PTGR1Q14914 329 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 ARHGEF6Q15052 776 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 HIST2H2ACQ16777 129 aaPredicted RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 PRTGQ2VWP7 1150 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 PLEKHO1Q53GL0 409 aaPredicted RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 Q5PR19 223 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 WASHC2DQ5SRD0 308 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 FAM205BPQ63HN1 556 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 FBXO46Q6PJ61 603 aaPredicted RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 TSSK4Q6SA08 328 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 PARM1Q6UWI2 310 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 IKBIPQ70UQ0 350 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 TRAPPC11Q7Z392 1133 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 MMP21Q8N119 569 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 ZCCHC9Q8N567 271 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 FRMD1Q8N878 549 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 ZMIZ2Q8NF64 920 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 CREB3L4Q8TEY5 395 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 PSPC1Q8WXF1 523 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 SMARCE1Q969G3 411 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 NLRP4Q96MN2 994 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 ISCUQ9H1K1 167 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 KIF9Q9HAQ2 790 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 FZD3Q9NPG1 666 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 EIF2B3Q9NR50 452 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 SIRT3Q9NTG7 399 aaPredicted RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 ELOVL5Q9NYP7 299 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 PLK2Q9NYY3 685 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 ZNF70Q9UC06 446 aaPredicted RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
VPS8-211ENST00000452140 A3GALT2U3KPV4 340 aa4.15□□□□□ -1.75
VPS8-211ENST00000452140 LY6G6EA0A0G2JKS1 128 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 IGLV5-39A0A0G2JS06 123 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 A0A1W2PQF6 199 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 AP3D1O14617 1153 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 PPEF2O14830 753 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 SEC14L5O43304 696 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 LDB2O43679 373 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 KLK8O60259 260 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 HNRNPCL1O60812 293 aaKnown RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 CCNDBP1O95273 360 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 SYF2O95926 243 aaKnown RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 MT-CYBP00156 380 aaPredicted RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 KLKB1P03952 638 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 MYZAPP0CAP1 466 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 LAMP2P13473 410 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 RARGP13631 454 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 KRT10P13645 584 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 PIP4K2AP48426 406 aaPredicted RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 PMS2P54278 862 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 SRSF1Q07955 248 aaKnown RBP eCLIP4.14□□□□□ -1.75
VPS8-211ENST00000452140 FAM27E3Q08E93 113 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 TRAF1Q13077 416 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 MAMLD1Q13495 774 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 GPR18Q14330 331 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 DUSP6Q16828 381 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 CCDC142Q17RM4 750 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 SOWAHAQ2M3V2 549 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 ZNF284Q2VY69 593 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 ZKSCAN2Q63HK3 967 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 CPLX2Q6PUV4 134 aaKnown RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 KLHL24Q6TFL4 600 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 COLCA1Q6ZS62 124 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 Q6ZTK2 550 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 PCGF5Q86SE9 256 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 SLC35F3Q8IY50 421 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 RBFAQ8N0V3 343 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 MIGA1Q8NAN2 632 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 C7orf57Q8NEG2 295 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 GABPB2Q8TAK5 448 aaPredicted RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 SLC35F5Q8WV83 523 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 LPAR1Q92633 364 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 USP6NLQ92738 828 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 ERGIC1Q969X5 290 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 MMABQ96EY8 250 aaPredicted RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 ZNF778Q96MU6 729 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 GFM1Q96RP9 751 aaKnown RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 MSTO1Q9BUK6 570 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 SLC29A3Q9BZD2 475 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 MUC13Q9H3R2 512 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 PLEKHA4Q9H4M7 779 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 PRKRIP1Q9H875 184 aaPredicted RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 MAGEE1Q9HCI5 957 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 BPIFA1Q9NP55 256 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 DDX4Q9NQI0 724 aaKnown RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 CYSLTR2Q9NS75 346 aa4.14□□□□□ -1.75
VPS8-211ENST00000452140 FBXO2Q9UK22 296 aaPredicted RBP4.14□□□□□ -1.75
VPS8-211ENST00000452140 ADAM18Q9Y3Q7 739 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms