RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SLC10A7Q0GE19 358 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 ELP6Q0PNE2 266 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 FZD2Q14332 565 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 MESDQ14696 234 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 LBRQ14739 615 aaKnown RBP9.77□□□□□ -0.85
USP54-207ENST00000451492 ACAP1Q15027 740 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 IRF4Q15306 451 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 SLC18A3Q16572 532 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 HADHQ16836 314 aaKnown RBP9.77□□□□□ -0.85
USP54-207ENST00000451492 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
USP54-207ENST00000451492 BOLA3Q53S33 107 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 TMCO4Q5TGY1 634 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 AFMIDQ63HM1 303 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 ERAP2Q6P179 960 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 KANSL1Q7Z3B3 1105 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 ABI3BPQ7Z7G0 1075 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 PARGQ86W56 976 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 PSTKQ8IV42 348 aaKnown RBP9.77□□□□□ -0.85
USP54-207ENST00000451492 VSTM4Q8IW00 320 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 RBFAQ8N0V3 343 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 NIPA2Q8N8Q9 360 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 MDM1Q8TC05 714 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 KLF6Q99612 283 aaPredicted RBP9.77□□□□□ -0.85
USP54-207ENST00000451492 CHP1Q99653 195 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 C1QTNF2Q9BXJ5 285 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 MBNL1Q9NR56 388 aaKnown RBP9.77□□□□□ -0.85
USP54-207ENST00000451492 TTLL3Q9Y4R7 772 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 ZFHX4Q86UP3 3567 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 CEP295Q9C0D2 2601 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 H3BM21 787 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 TRIM38O00635 465 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 H2AFZP0C0S5 128 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ELFN1P0C7U0 828 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 TNNT1P13805 278 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 SERPINB6P35237 376 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 MMP12P39900 470 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 RABIFP47224 123 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ACADVLP49748 655 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 LIG3P49916 1009 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ZNF135P52742 658 aaPredicted RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 TAS2R40P59535 323 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ITKQ08881 620 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 C1orf61Q13536 156 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 GRM3Q14832 879 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 UGP2Q16851 508 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 DEFB133Q30KQ1 61 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 DENND2CQ68D51 928 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 H2AFVQ71UI9 128 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 GALNT15Q8N3T1 639 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 SLC25A45Q8N413 288 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 LZTR1Q8N653 840 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 TP53I13Q8NBR0 393 aaPredicted RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 ZNF548Q8NEK5 533 aaPredicted RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 OR8K1Q8NGG5 319 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 LMX1AQ8TE12 382 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 NSMCE1Q8WV22 266 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 TEKT4Q8WW24 435 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 NSMCE3Q96MG7 304 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 DNAJC7Q99615 494 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 C1QTNF7Q9BXJ2 289 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 CPEB1Q9BZB8 566 aaKnown RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 TCEAL2Q9H3H9 227 aaPredicted RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 NT5MQ9NPB1 228 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 SCUBE2Q9NQ36 999 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 DKK3Q9UBP4 350 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 SEPT3Q9UH03 358 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 APOBEC3BQ9UH17 382 aaKnown RBP9.76□□□□□ -0.85
USP54-207ENST00000451492 NENFQ9UMX5 172 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ATP8A1Q9Y2Q0 1164 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 PCDHGC4Q9Y5F7 938 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 HS3ST3A1Q9Y663 406 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 USP24Q9UPU5 2620 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ACACBO00763 2458 aa9.76□□□□□ -0.85
USP54-207ENST00000451492 ZZEF1O43149 2961 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 DMXL2Q8TDJ6 3036 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 SPTY2D1-AS1A0A0U1RR47 76 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 RIOK3O14730 519 aaKnown RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 PROSCO94903 275 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 CPP00450 1065 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 ALPPL2P10696 532 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 JUNDP17535 347 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 CKMT2P17540 419 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 HNRNPH3P31942 346 aaKnown RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 MMP13P45452 471 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 HCAR3P49019 387 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 RENBPP51606 427 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 HNRNPKP61978 463 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP54-207ENST00000451492 DPYSL3Q14195 570 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 RFTN1Q14699 578 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 LRRC14Q15048 493 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 TMEM52BQ4KMG9 183 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 FAM182AQ5T1J6 154 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 HES3Q5TGS1 186 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 NCBP2-AS2Q69YL0 99 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 BRAT1Q6PJG6 821 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 CCNI2Q6ZMN8 369 aaPredicted RBP9.75□□□□□ -0.85
USP54-207ENST00000451492 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
USP54-207ENST00000451492 TMPRSS7Q7RTY8 843 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms