RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 MYO1AQ9UBC5 1043 aa16.2■□□□□ 0.18
SGCE-208ENST00000450385 SEPT3Q9UH03 358 aa16.2■□□□□ 0.18
SGCE-208ENST00000450385 LAMA5O15230 3695 aa16.2■□□□□ 0.18
SGCE-208ENST00000450385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.19■□□□□ 0.18
SGCE-208ENST00000450385 J3KR12 359 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 TPM1P09493 284 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 NME1P15531 152 aaKnown RBP16.19■□□□□ 0.18
SGCE-208ENST00000450385 GKP32189 559 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 BLKP51451 505 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 CLDN2P57739 230 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 AP1S1P61966 158 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 CA9Q16790 459 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 TMCO3Q6UWJ1 677 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 LEKR1Q6ZMV7 388 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 SRLQ86TD4 932 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 PROSER1Q86XN7 944 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 ARHGAP12Q8IWW6 846 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 SLC22A18ASQ8N1D0 253 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 CINPQ9BW66 212 aaPredicted RBP16.19■□□□□ 0.18
SGCE-208ENST00000450385 TRIM7Q9C029 511 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 FZD3Q9NPG1 666 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 HAUS2Q9NVX0 235 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 GPATCH2LQ9NWQ4 482 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 IFNKQ9P0W0 207 aa16.19■□□□□ 0.18
SGCE-208ENST00000450385 LRRK1Q38SD2 2015 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 A0A087X0T9 212 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 SSU72P8A0A1W2PR75 194 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 GOLGA8CPA6NN73 597 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 SRRM3A6NNA2 597 aaPredicted RBP16.18■□□□□ 0.18
SGCE-208ENST00000450385 GYPCP04921 128 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 FAM228BP0C875 321 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 CKMT1AP12532 417 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 JUPP14923 745 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 BCL2L1Q07817 233 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 FZD2Q14332 565 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 NFKBIBQ15653 356 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 SPECC1LQ69YQ0 1117 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 DHRS13Q6UX07 377 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 OR8K1Q8NGG5 319 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 ATL2Q8NHH9 583 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 FAM71BQ8TC56 605 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 CPLX3Q8WVH0 158 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 ECHDC3Q96DC8 303 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 CELF6Q96J87 481 aaKnown RBP16.18■□□□□ 0.18
SGCE-208ENST00000450385 NUP85Q9BW27 656 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 THAP2Q9H0W7 228 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 ZNHIT6Q9NWK9 470 aaKnown RBP16.18■□□□□ 0.18
SGCE-208ENST00000450385 DNAJC28Q9NX36 388 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 SALL4Q9UJQ4 1053 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 ANAPC7Q9UJX3 599 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 CA5BQ9Y2D0 317 aa16.18■□□□□ 0.18
SGCE-208ENST00000450385 MYLKQ15746 1914 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 RAD51BO15315 384 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 SPINT1O43278 529 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 SIGLEC6O43699 453 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 KRT37O76014 449 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 H2AFZP0C0S5 128 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 RARAP10276 462 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 CES1P23141 567 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 THOP1P52888 689 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 CDH6P55285 790 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 CAMK2BQ13554 666 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 PDE1CQ14123 709 aaPredicted RBP16.17■□□□□ 0.18
SGCE-208ENST00000450385 LBRQ14739 615 aaKnown RBP16.17■□□□□ 0.18
SGCE-208ENST00000450385 LRRC14Q15048 493 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 SLC18A3Q16572 532 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 ZCCHC8Q6NZY4 707 aaKnown RBP16.17■□□□□ 0.18
SGCE-208ENST00000450385 H2AFVQ71UI9 128 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 MAP7D3Q8IWC1 876 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 TSEN2Q8NCE0 465 aaKnown RBP16.17■□□□□ 0.18
SGCE-208ENST00000450385 TPCN2Q8NHX9 752 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 GLMNQ92990 594 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 FATE1Q969F0 183 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 GRAMD1AQ96CP6 724 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 CSPG4P5Q96PW8 444 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 MYOCQ99972 504 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 NRSN2Q9GZP1 204 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.17■□□□□ 0.18
SGCE-208ENST00000450385 SPASTQ9UBP0 616 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 AMACRQ9UHK6 382 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 ATP8A1Q9Y2Q0 1164 aa16.17■□□□□ 0.18
SGCE-208ENST00000450385 CHD6Q8TD26 2715 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 DFFAO00273 331 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 TRIM38O00635 465 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 MMP20O60882 483 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 SOCS5O75159 536 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 HOXC4P09017 264 aaPredicted RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 IL1R2P27930 398 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 HTR1BP28222 390 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 CASP14P31944 242 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 MMP12P39900 470 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 PDK2Q15119 407 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 LVRNQ6Q4G3 990 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 MACC1Q6ZN28 852 aa16.16■□□□□ 0.18
SGCE-208ENST00000450385 TP53I13Q8NBR0 393 aaPredicted RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 CTNNBL1Q8WYA6 563 aaPredicted RBP16.16■□□□□ 0.18
SGCE-208ENST00000450385 DNAJC7Q99615 494 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms