RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MTF2Q9Y483 593 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 AP3B1O00203 1094 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 LEFTY1O75610 366 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 PGLSO95336 258 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 NDST3O95803 873 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 PRNPP04156 253 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 HLA-DPA1P20036 260 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 ARSIQ5FYB1 569 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 GSPT2Q8IYD1 628 aaKnown RBP14.17□□□□□ -0.14
SHMT2-203ENST00000449049 TMIEQ8NEW7 156 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 OR52K1Q8NGK4 314 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 RPLP0P6Q8NHW5 317 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 GRIN3AQ8TCU5 1115 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 PWWP2AQ96N64 755 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 FMO2Q99518 471 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 APOL2Q9BQE5 337 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 CD248Q9HCU0 757 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 PPM1HQ9ULR3 514 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 CHKBQ9Y259 395 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 A0A1W2PQF6 199 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 TSPAN11A1L157 253 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 UGT2B4P06133 528 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 PDHA1P08559 390 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 HOXB2P14652 356 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 CHRNA4P43681 627 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 ARL4CP56559 192 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 RPL26P61254 145 aaKnown RBP14.17□□□□□ -0.14
SHMT2-203ENST00000449049 CDH17Q12864 832 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 UBXN2BQ14CS0 331 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 HIF1AQ16665 826 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 SIRPB2Q5JXA9 342 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 EOGTQ5NDL2 527 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 FNBP1LQ5T0N5 605 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 ARMC12Q5T9G4 340 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 KDELC2Q7Z4H8 507 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 HCAR2Q8TDS4 363 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 ADGRE3Q9BY15 652 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 OSBPL6Q9BZF3 934 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 FOXQ1Q9C009 403 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 TBC1D17Q9HA65 648 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 LMAN1LQ9HAT1 526 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 MMP17Q9ULZ9 603 aa14.17□□□□□ -0.14
SHMT2-203ENST00000449049 RPL26L1Q9UNX3 145 aaKnown RBP14.17□□□□□ -0.14
SHMT2-203ENST00000449049 A0A1W2PQ67 120 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 CHURC1-FNTBB4DL54 471 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 E7ESA3 106 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 SYNCRIPO60506 623 aaKnown RBP14.16□□□□□ -0.14
SHMT2-203ENST00000449049 FGF1P05230 155 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 TNNT3P45378 269 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-203ENST00000449049 GALNT3Q14435 633 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 DSG4Q86SJ6 1040 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 PDIK1LQ8N165 341 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 PIH1D2Q8WWB5 315 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 RSPH9Q9H1X1 276 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-203ENST00000449049 FBRSQ9HAH7 460 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 PCDHB9Q9Y5E1 797 aa14.16□□□□□ -0.14
SHMT2-203ENST00000449049 FAM170BA6NMN3 283 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 EIF3HO15372 352 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 AVILO75366 819 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 C7P10643 843 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 COL9A1P20849 921 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 GRIA4P48058 902 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 MSLNQ13421 630 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 STARD3Q14849 445 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 MSS51Q4VC12 460 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 ZNF805Q5CZA5 627 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 KIAA1211LQ6NV74 962 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 PKN3Q6P5Z2 889 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 Q6ZS52 159 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 ZSWIM9Q86XI8 627 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 SLC25A41Q8N5S1 370 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 DNAAF3Q8N9W5 541 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 LPCAT1Q8NF37 534 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 OR2T3Q8NH03 318 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 PIP4K2CQ8TBX8 421 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 PDCD6IPQ8WUM4 868 aaKnown RBP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 KLHL32Q96NJ5 620 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 TSPYL1Q9H0U9 437 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 DKK3Q9UBP4 350 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 SARDHQ9UL12 918 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 CPP00450 1065 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 FAM153BP0C7A2 387 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 ALADP13716 330 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 COPAP53621 1224 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 SIGLEC14Q08ET2 396 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 FAM153CQ494X1 144 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 BRAT1Q6PJG6 821 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 CEP128Q6ZU80 1094 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 CENPUQ71F23 418 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 AGGF1Q8N302 714 aaeCLIP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 PJA1Q8NG27 643 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 AENQ8WTP8 325 aaKnown RBP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 EDAQ92838 391 aa14.15□□□□□ -0.14
SHMT2-203ENST00000449049 UHRF1Q96T88 793 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 PIH1D1Q9NWS0 290 aaKnown RBP14.15□□□□□ -0.14
SHMT2-203ENST00000449049 ANKRD66B4E2M5 251 aa14.14□□□□□ -0.15
SHMT2-203ENST00000449049 C1QTNF3-AMACRE9PGA6 284 aa14.14□□□□□ -0.15
SHMT2-203ENST00000449049 ITGB7P26010 798 aa14.14□□□□□ -0.15
SHMT2-203ENST00000449049 NPY2RP49146 381 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms