RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 CR2P20023 1033 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 CA4P22748 312 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 NFKBIAP25963 317 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 MAT2AP31153 395 aaKnown RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 ABL2P42684 1182 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 RPS21P63220 83 aaKnown RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 IFI35P80217 286 aaPredicted RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 ELP6Q0PNE2 266 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 XRCC4Q13426 336 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 SF3A2Q15428 464 aaKnown RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 TEAD4Q15561 434 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 SETMARQ53H47 684 aaPredicted RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 MEI1Q5TIA1 1274 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 KIAA1161Q6NSJ0 714 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 AADACL2Q6P093 401 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 B4GALNT4Q76KP1 1039 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 ADAT2Q7Z6V5 191 aaKnown RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 ZSCAN30Q86W11 494 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 HORMAD1Q86X24 394 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 TTC13Q8NBP0 860 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 CXorf40AQ8TE69 158 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 IL12RB2Q99665 862 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 AASDHPPTQ9NRN7 309 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 DMTF1Q9Y222 760 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 PCDHGC4Q9Y5F7 938 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 GPR179Q6PRD1 2367 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 TSPAN11A1L157 253 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 UPK3BL1B0FP48 263 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 PATE3B3GLJ2 98 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 UPK3BL2E5RIL1 263 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 LATO43561 262 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SOCS5O75159 536 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 HLA-DQB2P05538 268 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SYPP08247 313 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 AFF3P51826 1226 aaKnown RBP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 ATXN3P54252 364 aaPredicted RBP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 DSC2Q02487 901 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 LMNB2Q03252 620 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SGCGQ13326 291 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 PRKD1Q15139 912 aaPredicted RBP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 NOMO1Q15155 1222 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 UGP2Q16851 508 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SLC45A4Q5BKX6 768 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 LRRC73Q5JTD7 316 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 ARMC12Q5T9G4 340 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 TCEAL6Q6IPX3 200 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SLC23A3Q6PIS1 610 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 TCEAL3Q969E4 200 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SKA1Q96BD8 255 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 SERAC1Q96JX3 654 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 AGAP3Q96P47 875 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 QKIQ96PU8 341 aaKnown RBP eCLIP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 TRMT1Q9NXH9 659 aaKnown RBP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 ATP8A1Q9Y2Q0 1164 aa14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.14□□□□□ -0.15
GTF3C3-206ENST00000448539 TRAFD1O14545 582 aaPredicted RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 KCNK3O14649 394 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 SLC31A1O15431 190 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 HTRA2O43464 458 aaPredicted RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 ZNF189O75820 626 aaPredicted RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 CPP00450 1065 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 TGM1P22735 817 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 AKT2P31751 481 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 EIF3EP60228 445 aaKnown RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 FAM193AP78312 1265 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 IRX4P78413 519 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 OTUD4Q01804 1114 aaKnown RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 ZBTB17Q13105 803 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 NUMA1Q14980 2115 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 RSPO4Q2I0M5 234 aaPredicted RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 TEX44Q53QW1 395 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 ALG1LQ6GMV1 187 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 DARS2Q6PI48 645 aaKnown RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 CDKL3Q8IVW4 592 aaPredicted RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 NDUFAF2Q8N183 169 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 ACTL9Q8TC94 416 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 HTR3CQ8WXA8 447 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 KLK6Q92876 244 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 VOPP1Q96AW1 172 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 ECHDC3Q96DC8 303 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 VAT1Q99536 393 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 CEP41Q9BYV8 373 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 TM9SF3Q9HD45 589 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 PCDH12Q9NPG4 1184 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 ITM2BQ9Y287 266 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 PCDHB9Q9Y5E1 797 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 RAI2Q9Y5P3 530 aa14.13□□□□□ -0.15
GTF3C3-206ENST00000448539 PRAMEF26H0Y7S4 382 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 AREL1O15033 823 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 KIF5CO60282 957 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 STK10O94804 968 aaKnown RBP14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 RBP3P10745 1247 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 PRLRP16471 622 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 PTPN3P26045 913 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 CD86P42081 329 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 EPHB1P54762 984 aa14.12□□□□□ -0.15
GTF3C3-206ENST00000448539 C21orf59P57076 290 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms