RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 MT-CO3P00414 261 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 CKMT1AP12532 417 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 PRLRP16471 622 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 SLC1A1P43005 524 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 DUSP3P51452 185 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 CLDN6P56747 220 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 RPS21P63220 83 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 FAM72AQ5TYM5 149 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 FAM72DQ6L9T8 149 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 C22orf39Q6P5X5 142 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 DPY19L3Q6ZPD9 716 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 ABI3BPQ7Z7G0 1075 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 FAM72BQ86X60 149 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 SYCE1Q8N0S2 351 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 CHST14Q8NCH0 376 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 LSM14AQ8ND56 463 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 ALG3Q92685 438 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 KLK6Q92876 244 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 C16orf45Q96MC5 204 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 BBC3Q96PG8 261 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 KCTD15Q96SI1 283 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 SPON2Q9BUD6 331 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 DUSP23Q9BVJ7 150 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 DHX35Q9H5Z1 703 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 USP29Q9HBJ7 922 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 MPP6Q9NZW5 540 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 PPARGC1AQ9UBK2 798 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 AMFRQ9UKV5 643 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 AP4E1Q9UPM8 1137 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
PDLIM2-213ENST00000448520 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 LEFTY1O75610 366 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 KRT1P04264 644 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 CD48P09326 243 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 DESP17661 470 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 ITPKBP27987 946 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 ETFBP38117 255 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 NEK3P51956 506 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 HNRNPKP61978 463 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 ARTNQ5T4W7 220 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 MEI1Q5TIA1 1274 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 KIAA1161Q6NSJ0 714 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 AADACL2Q6P093 401 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 LINGO4Q6UY18 593 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 Q6ZSR6 202 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 TFAP2DQ7Z6R9 452 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 RHOT1Q8IXI2 618 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 LSMEM2Q8N112 164 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 FAM181AQ8N9Y4 354 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 TRIM58Q8NG06 486 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 OR13H1Q8NG92 308 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 OR7D4Q8NG98 312 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 RAPGEF5Q92565 580 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 NTAN1Q96AB6 310 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 ISG20Q96AZ6 181 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 TLR10Q9BXR5 811 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 CALN1Q9BXU9 219 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 SLC17A9Q9BYT1 436 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 ZYG11BQ9C0D3 744 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 PRORYQ9H606 182 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 NLGN3Q9NZ94 848 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-213ENST00000448520 SMG1Q96Q15 3661 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 A6NNZ2 444 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 SCAMP1O15126 338 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 AP1G1O43747 822 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ZNF821O75541 412 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ZMPSTE24O75844 475 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 PAK4O96013 591 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 GP1BAP07359 652 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ITGB7P26010 798 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 CTNNA2P26232 953 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 L1CAMP32004 1257 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 CTNNA1P35221 906 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 SERPINH1P50454 418 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ARSEP51690 589 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 GNA12Q03113 381 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 HADHQ16836 314 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 TBC1D25Q3MII6 688 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ARL13BQ3SXY8 428 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 TMEM259Q4ZIN3 620 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ZFYVE27Q5T4F4 411 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 ERMARDQ5T6L9 678 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 GRIN3AQ8TCU5 1115 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 RAB7BQ96AH8 199 aa13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 CALR3Q96L12 384 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-213ENST00000448520 BMFQ96LC9 184 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms