RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 SLC1A1P43005 524 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 C21orf59P57076 290 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 PAFAH1B3Q15102 231 aaKnown RBP25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 SETMARQ53H47 684 aaPredicted RBP25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 TMCO4Q5TGY1 634 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 SEL1L3Q68CR1 1132 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 NEK5Q6P3R8 708 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 PQLC3Q8N755 202 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 ACRBPQ8NEB7 543 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 ZNF599Q96NL3 588 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 DKK4Q9UBT3 224 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 SEPT3Q9UH03 358 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 GGT7Q9UJ14 662 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 TPX2Q9ULW0 747 aaKnown RBP25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 ZFR2Q9UPR6 939 aaKnown RBP25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 ITM2BQ9Y287 266 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 CA5BQ9Y2D0 317 aa25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 REXO2Q9Y3B8 237 aaKnown RBP25.31■■□□□ 1.64
HTATSF1-203ENST00000448450 TRPM6Q9BX84 2022 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 TTC24A2A3L6 582 aaPredicted RBP25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 GOLGA8CPA6NN73 597 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 NEMP1O14524 444 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 DKK1O94907 266 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 KRT1P04264 644 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 ITIH2P19823 946 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 SCNN1BP51168 640 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 ZNF284Q2VY69 593 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 ODF2Q5BJF6 829 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 NAPEPLDQ6IQ20 393 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 CAMK1DQ8IU85 385 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 RHOT1Q8IXI2 618 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 LRRN4Q8WUT4 740 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 RNF25Q96BH1 459 aaPredicted RBP25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 FAF2Q96CS3 445 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 FEM1CQ96JP0 617 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 RNF157Q96PX1 679 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 SUV39H2Q9H5I1 410 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 SCUBE2Q9NQ36 999 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 BTBD3Q9Y2F9 522 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 ALG6Q9Y672 507 aa25.3■■□□□ 1.64
HTATSF1-203ENST00000448450 VILLO15195 856 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 PEX11BO96011 259 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 TIMP2P16035 220 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 GRK6P43250 576 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 HADHBP55084 474 aaKnown RBP25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 ZNF235Q14590 738 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 SOWAHCQ53LP3 525 aaPredicted RBP25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 LRRC38Q5VT99 294 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 NSMCE1Q8WV22 266 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 HNRNPLLQ8WVV9 542 aaKnown RBP25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 RAB7BQ96AH8 199 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 FZD3Q9NPG1 666 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 SALL4Q9UJQ4 1053 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 DMTF1Q9Y222 760 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 DUSP10Q9Y6W6 482 aa25.29■■□□□ 1.64
HTATSF1-203ENST00000448450 TP53BP1Q12888 1972 aaPredicted RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 A0A0A6YYK5 440 aaPredicted RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 A0A1W2PR77 199 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 C3orf70A6NLC5 250 aaPredicted RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 AP1G1O43747 822 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 XPAP23025 273 aaPredicted RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 NUDT1P36639 197 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 CSNK1DP48730 415 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 CCT8P50990 548 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 RENBPP51606 427 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 NAP1L1P55209 391 aaKnown RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 GBE1Q04446 702 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 NSUN2Q08J23 767 aaKnown RBP eCLIP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 STAT4Q14765 748 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 PRAMEF14Q5SWL7 426 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 TMEM139Q8IV31 216 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 PSKH2Q96QS6 385 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 MAK16Q9BXY0 300 aaKnown RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 DKK3Q9UBP4 350 aa25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 URB1O60287 2271 aaKnown RBP25.28■■□□□ 1.64
HTATSF1-203ENST00000448450 IGLON5A6NGN9 336 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 PRAMEF26H0Y7S4 382 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 SPINT1O43278 529 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 TNFSF14O43557 240 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 GARSP41250 739 aaKnown RBP25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 CTSKP43235 329 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 RPS21P63220 83 aaKnown RBP25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 GALNT2Q10471 571 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 SLC10A2Q12908 348 aaPredicted RBP25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 GRM3Q14832 879 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 INAVAQ3KP66 663 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 TMEM259Q4ZIN3 620 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 SLC45A4Q5BKX6 768 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 CFAP58Q5T655 872 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 MARC1Q5VT66 337 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 PGBD5Q8N414 524 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 PAF1Q8N7H5 531 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 SKA1Q96BD8 255 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 NSMCE3Q96MG7 304 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 SLC17A9Q9BYT1 436 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 ATP13A3Q9H7F0 1226 aa25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 DDX56Q9NY93 547 aaKnown RBP25.27■■□□□ 1.64
HTATSF1-203ENST00000448450 ANKRD36A6QL64 1941 aa25.26■■□□□ 1.63
HTATSF1-203ENST00000448450 TSPAN6O43657 245 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms