RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 UPK3BL2E5RIL1 263 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 WNT9AO14904 365 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 LATO43561 262 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 JCHAINP01591 159 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 SERPINF2P08697 491 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 PYGMP11217 842 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 CR2P20023 1033 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 CSNK1DP48730 415 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 PEX5P50542 639 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 AFF3P51826 1226 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 ATXN3P54252 364 aaPredicted RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
RFC4-208ENST00000447345 TRAF2Q12933 501 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 GRIK2Q13002 908 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 HNRNPDQ14103 355 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 GRM3Q14832 879 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 PPP2R5EQ16537 467 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 PRPF39Q86UA1 669 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 HORMAD1Q86X24 394 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 RNF10Q8N5U6 811 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 TEX26Q8N6G2 289 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 MAML1Q92585 1016 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 P3H4Q92791 437 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 TSGA13Q96PP4 275 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 FAM118BQ9BPY3 351 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 OSBPL8Q9BZF1 889 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 POLR1EQ9GZS1 481 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 CAPN10Q9HC96 672 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 CDV3Q9UKY7 258 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 ZFR2Q9UPR6 939 aaKnown RBP12.03□□□□□ -0.48
RFC4-208ENST00000447345 PPP2R2CQ9Y2T4 447 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
RFC4-208ENST00000447345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.02□□□□□ -0.49
RFC4-208ENST00000447345 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 MIF4GDA9UHW6 222 aaKnown RBP12.02□□□□□ -0.49
RFC4-208ENST00000447345 DDX3YO15523 660 aaKnown RBP12.02□□□□□ -0.49
RFC4-208ENST00000447345 FOXD2O60548 495 aaPredicted RBP12.02□□□□□ -0.49
RFC4-208ENST00000447345 TIMP2P16035 220 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 NR2C2P49116 596 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 COPS2P61201 443 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 GSE1Q14687 1217 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 TEAD4Q15561 434 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 UGP2Q16851 508 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 RSPO4Q2I0M5 234 aaPredicted RBP12.02□□□□□ -0.49
RFC4-208ENST00000447345 ZNF284Q2VY69 593 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 UAP1L1Q3KQV9 507 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 NAPEPLDQ6IQ20 393 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 KIAA1161Q6NSJ0 714 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 BBS12Q6ZW61 710 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 C1orf216Q8TAB5 229 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 CXorf40AQ8TE69 158 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 RAB7BQ96AH8 199 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 ZNF641Q96N77 438 aaPredicted RBP12.02□□□□□ -0.49
RFC4-208ENST00000447345 AGAP3Q96P47 875 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 ALS2CR12Q96Q35 445 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 PCDH12Q9NPG4 1184 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
RFC4-208ENST00000447345 MYLKQ15746 1914 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 SCN8AQ9UQD0 1980 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 IGLON5A6NGN9 336 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 C4orf47A7E2U8 309 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 A8MX80 341 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 PRR5-ARHGAP8B1AHC4 643 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 C10orf142B7Z368 130 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 F5H423 210 aaPredicted RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 H0Y8X5 98 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 APOC4-APOC2K7ER74 178 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 AREL1O15033 823 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 TSPAN6O43657 245 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 AP1G1O43747 822 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 MMP20O60882 483 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 SOCS5O75159 536 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 CPP00450 1065 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 APOC2P02655 101 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 WNT1P04628 370 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 CETN2P41208 172 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 GRIA4P48058 902 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 C21orf59P57076 290 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 CLDN2P57739 230 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 RPS21P63220 83 aaKnown RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 RACK1P63244 317 aaKnown RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 FAM193AP78312 1265 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 IFI35P80217 286 aaPredicted RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 OTUD4Q01804 1114 aaKnown RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 PRKD1Q15139 912 aaPredicted RBP12.01□□□□□ -0.49
RFC4-208ENST00000447345 KIF19Q2TAC6 998 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 TMEM259Q4ZIN3 620 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 STPG1Q5TH74 334 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 ERAP2Q6P179 960 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 NEK5Q6P3R8 708 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 BRAT1Q6PJG6 821 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 KDM7AQ6ZMT4 941 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 MINDY1Q8N5J2 469 aa12.01□□□□□ -0.49
RFC4-208ENST00000447345 ACTL9Q8TC94 416 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms