RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 VPS45Q9NRW7 570 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 BCCIPQ9P287 314 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 DMGDHQ9UI17 866 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 AAR2Q9Y312 384 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 PCDHB9Q9Y5E1 797 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 GOLGA6CA6NDK9 693 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 GOLGA6BA6NDN3 693 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 C16orf96A6NNT2 1141 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 DNALI1O14645 258 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 PGLSO95336 258 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 AP2A1O95782 977 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 ADH1BP00325 375 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 CPP00450 1065 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 RHOXF2BP0C7M4 288 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 GOLGA6DP0CG33 693 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 ADRA1AP35348 466 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 PXNP49023 591 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 CDK18Q07002 472 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 KCNJ11Q14654 390 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 PTPRRQ15256 657 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 TRADDQ15628 312 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 CFAP58Q5T655 872 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 ARMC12Q5T9G4 340 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 FAM46CQ5VWP2 391 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 DUPD1Q68J44 220 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 BMP8AQ7Z5Y6 402 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 AADATQ8N5Z0 425 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 LPCAT1Q8NF37 534 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 PRCCQ92733 491 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 ECHDC3Q96DC8 303 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 IFT43Q96FT9 208 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 FEM1CQ96JP0 617 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 PPP1R2P1Q96PQ5 205 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 TRIB3Q96RU7 358 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 TBL1YQ9BQ87 522 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 RHOXF2Q9BQY4 288 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 IER2Q9BTL4 223 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 FSD1LQ9BXM9 530 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 PABPC3Q9H361 631 aaKnown RBP18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 CD93Q9NPY3 652 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 GOLGA6AQ9NYA3 693 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 SERGEFQ9UGK8 458 aa18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 UTP11Q9Y3A2 253 aaKnown RBP18.13■□□□□ 0.49
TRAPPC4-203ENST00000447216 CEP192Q8TEP8 1941 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 TRPM6Q9BX84 2022 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 A0A1W2PP55 124 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 ESYT3A0FGR9 886 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 PSMD3O43242 534 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 FZD6O60353 706 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 TMEM63AO94886 807 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 DNTTP04053 509 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 TIMP2P16035 220 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 CTPS1P17812 591 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 ITIH2P19823 946 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 C5AR1P21730 350 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 CA4P22748 312 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 ITGB7P26010 798 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 DRD3P35462 400 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 GRIA1P42261 906 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 CCR3P51677 355 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 SEMG2Q02383 582 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 GUCY2DQ02846 1103 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 CNTN1Q12860 1018 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 RNASEH2BQ5TBB1 312 aaKnown RBP18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 HDDC3Q8N4P3 179 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 MDGA1Q8NFP4 955 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 GANCQ8TET4 914 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 PIH1D2Q8WWB5 315 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 SNF8Q96H20 258 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 TPSD1Q9BZJ3 242 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 RAB17Q9H0T7 212 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 LRRC40Q9H9A6 602 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 C11orf16Q9NQ32 467 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 DYRK4Q9NR20 520 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 PIH1D1Q9NWS0 290 aaKnown RBP18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 DKK3Q9UBP4 350 aa18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 TPX2Q9ULW0 747 aaKnown RBP18.12■□□□□ 0.49
TRAPPC4-203ENST00000447216 PLXND1Q9Y4D7 1925 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 LOC285095A0A1B0GVY8 99 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 TSPAN11A1L157 253 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 GOLGA8MH3BSY2 632 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 K7ESF4 209 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 ALDH1A2O94788 518 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 SEC31AO94979 1220 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 APBB3O95704 486 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 NDST3O95803 873 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 ATXN1LP0C7T5 689 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 TPSB2P20231 275 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 P2RY2P41231 377 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 ABL2P42684 1182 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 MAGEA6P43360 314 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 ITGA8P53708 1063 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 EPHB1P54762 984 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 TPSAB1Q15661 275 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 GLE1Q53GS7 698 aaKnown RBP18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 SIRPB2Q5JXA9 342 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 TMEM31Q5JXX7 168 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 TSSK4Q6SA08 328 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 PPIL6Q8IXY8 311 aa18.11■□□□□ 0.49
TRAPPC4-203ENST00000447216 NAT8LQ8N9F0 302 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms