RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 PALMO75781 387 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 PRKCGP05129 697 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 CKMT1AP12532 417 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 AMPD1P23109 780 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 CSNK1DP48730 415 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 DAB2P98082 770 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 C19orf48Q6RUI8 117 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 PARGQ86W56 976 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 ZNF548Q8NEK5 533 aaPredicted RBP20.95■□□□□ 0.94
SDC1-205ENST00000447124 BTBD6Q96KE9 485 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 ZNF641Q96N77 438 aaPredicted RBP20.95■□□□□ 0.94
SDC1-205ENST00000447124 THAP2Q9H0W7 228 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 PCDH12Q9NPG4 1184 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 NLGN3Q9NZ94 848 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 COQ6Q9Y2Z9 468 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 BZW2Q9Y6E2 419 aaKnown RBP20.95■□□□□ 0.94
SDC1-205ENST00000447124 CELSR3Q9NYQ7 3312 aa20.95■□□□□ 0.94
SDC1-205ENST00000447124 A0A087X0T9 212 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 NEMP2A6NFY4 417 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 DFFAO00273 331 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 RIOK3O14730 519 aaKnown RBP20.94■□□□□ 0.94
SDC1-205ENST00000447124 FAM228BP0C875 321 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 RARAP10276 462 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 JUNDP17535 347 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 SUOXP51687 545 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 ZBED6P86452 979 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 ACAP1Q15027 740 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 SMTNL2Q2TAL5 461 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 WSCD2Q2TBF2 565 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 BOLA3Q53S33 107 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 TDRD12Q587J7 1177 aaKnown RBP20.94■□□□□ 0.94
SDC1-205ENST00000447124 POLNQ7Z5Q5 900 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 FAM181AQ8N9Y4 354 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 NCAPGQ9BPX3 1015 aa20.94■□□□□ 0.94
SDC1-205ENST00000447124 SERPING1P05155 500 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 XPAP23025 273 aaPredicted RBP20.93■□□□□ 0.94
SDC1-205ENST00000447124 ZNF135P52742 658 aaPredicted RBP20.93■□□□□ 0.94
SDC1-205ENST00000447124 TPM4P67936 248 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 E2F1Q01094 437 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 IL10RBQ08334 325 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 NSUN2Q08J23 767 aaKnown RBP eCLIP20.93■□□□□ 0.94
SDC1-205ENST00000447124 GRM3Q14832 879 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 DPYSL2Q16555 572 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 RBFAQ8N0V3 343 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 CACTIN-AS1Q8N1I8 211 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 TUBGCP5Q96RT8 1024 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 ZWILCHQ9H900 591 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 IFNKQ9P0W0 207 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 CSNK1G3Q9Y6M4 447 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 MYLKQ15746 1914 aa20.93■□□□□ 0.94
SDC1-205ENST00000447124 CACNA1GO43497 2377 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 TTC24A2A3L6 582 aaPredicted RBP20.92■□□□□ 0.94
SDC1-205ENST00000447124 GCATO75600 419 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 PEX11BO96011 259 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 MT-CO3P00414 261 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 CYP1A2P05177 515 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 ALPPL2P10696 532 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 HNF1BP35680 557 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 EIF4A3P38919 411 aaKnown RBP20.92■□□□□ 0.94
SDC1-205ENST00000447124 YPEL5P62699 121 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 SLC10A7Q0GE19 358 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 ELP6Q0PNE2 266 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 C1orf61Q13536 156 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 IRF4Q15306 451 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 HS1BP3Q53T59 392 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 NYAP1Q6ZVC0 841 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 DCBLD1Q8N8Z6 715 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 LMX1AQ8TE12 382 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 HSPH1Q92598 858 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 ECHDC3Q96DC8 303 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 SP110Q9HB58 689 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 LHX6Q9UPM6 363 aa20.92■□□□□ 0.94
SDC1-205ENST00000447124 H3BRJ5 948 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 AQP9O43315 295 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 GYPCP04921 128 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 C6P13671 934 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 IL4RP24394 825 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 LIG3P49916 1009 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 THOP1P52888 689 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 PTK2BQ14289 1009 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 PIGHQ14442 188 aaPredicted RBP20.91■□□□□ 0.94
SDC1-205ENST00000447124 RFTN1Q14699 578 aaPredicted RBP20.91■□□□□ 0.94
SDC1-205ENST00000447124 DEFB133Q30KQ1 61 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 CDCP2Q5VXM1 449 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 BRAT1Q6PJG6 821 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 LZTR1Q8N653 840 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 HNRNPLLQ8WVV9 542 aaKnown RBP20.91■□□□□ 0.94
SDC1-205ENST00000447124 CSPG4P5Q96PW8 444 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 DUSP23Q9BVJ7 150 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 NUP85Q9BW27 656 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 CINPQ9BW66 212 aaPredicted RBP20.91■□□□□ 0.94
SDC1-205ENST00000447124 PCDH18Q9HCL0 1135 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 NENFQ9UMX5 172 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 CLCA2Q9UQC9 943 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 ATP8A1Q9Y2Q0 1164 aa20.91■□□□□ 0.94
SDC1-205ENST00000447124 LUC7L2Q9Y383 392 aaKnown RBP20.91■□□□□ 0.94
SDC1-205ENST00000447124 LRRK1Q38SD2 2015 aa20.9■□□□□ 0.94
SDC1-205ENST00000447124 GOLGA6L19H0YKK7 550 aa20.9■□□□□ 0.94
SDC1-205ENST00000447124 H3BM21 787 aa20.9■□□□□ 0.94
SDC1-205ENST00000447124 TRAFD1O14545 582 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms