RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PTP4A2Q12974 167 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PDZK1IP1Q13113 114 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 DUSP4Q13115 394 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ART3Q13508 389 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 OLIG2Q13516 323 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CUL3Q13618 768 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 E2F2Q14209 437 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KCNJ12Q14500 433 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PON2Q15165 354 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PCSK7Q16549 785 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 UGT8Q16880 541 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PARP6Q2NL67 630 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SMTNL2Q2TAL5 461 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SLC36A3Q495N2 470 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 NADK2Q4G0N4 442 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CCDC58Q4VC31 144 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 MPPE1Q53F39 396 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PLEKHO1Q53GL0 409 aaPredicted RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TJAP1Q5JTD0 557 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TMEM201Q5SNT2 666 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 NOL9Q5SY16 702 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CLVS2Q5SYC1 327 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PIP5KL1Q5T9C9 394 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 C6orf163Q5TEZ5 329 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CARD17Q5XLA6 110 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CWF19L1Q69YN2 538 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 GRAMD4Q6IC98 578 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KIAA1161Q6NSJ0 714 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KLHL35Q6PF15 583 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 BLOC1S3Q6QNY0 202 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 C15orf39Q6ZRI6 1047 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CHSY3Q70JA7 882 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 RNF44Q7L0R7 432 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 BZW1Q7L1Q6 419 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KCTD9Q7L273 389 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 OTOP1Q7RTM1 612 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 OVCH1Q7RTY7 1134 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KANSL1Q7Z3B3 1105 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SPATA19Q7Z5L4 167 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 RTN4RL1Q86UN2 441 aaPredicted RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 AMZ2Q86W34 360 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 LONP2Q86WA8 852 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PLCZ1Q86YW0 608 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TICAM1Q8IUC6 712 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 MCATQ8IVS2 390 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CMIPQ8IY22 773 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TIGD4Q8IY51 512 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 MB21D2Q8IYB1 491 aaPredicted RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CMTR1Q8N1G2 835 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 MEIOBQ8N635 442 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SCAIQ8N9R8 606 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 FNDC5Q8NAU1 212 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 GLB1L3Q8NCI6 653 aaPredicted RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SPATA4Q8NEY3 305 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF397Q8NF99 534 aaPredicted RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 FLAD1Q8NFF5 587 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 OR7G3Q8NG95 312 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 OR10T2Q8NGX3 314 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 EXD1Q8NHP7 514 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 UBA3Q8TBC4 463 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 RAB3IL1Q8TBN0 382 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 DDX54Q8TDD1 881 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ST7LQ8TDW4 575 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TAS1R2Q8TE23 839 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 XAGE3Q8WTP9 111 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ZDHHC1Q8WTX9 485 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TGFBRAP1Q8WUH2 860 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SLC20A1Q8WUM9 679 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KBTBD7Q8WVZ9 684 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 CAPSLQ8WWF8 208 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 LIPHQ8WWY8 451 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PSPC1Q8WXF1 523 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 RLN3Q8WXF3 142 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 IRGQQ8WZA9 623 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SMG7Q92540 1137 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 DPF2Q92785 391 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 EDAQ92838 391 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 GAL3ST3Q96A11 431 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 NMD3Q96D46 503 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 MRPL38Q96DV4 380 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ACSBG1Q96GR2 724 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 XAGE2Q96GT9 111 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 C5orf30Q96GV9 206 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PGAM5Q96HS1 289 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 HES6Q96HZ4 224 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SLC41A2Q96JW4 573 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SNX22Q96L94 193 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 KLHL5Q96PQ7 755 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SLC2A13Q96QE2 648 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 JPH2Q9BR39 696 aaPredicted RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ACBD6Q9BR61 282 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 C11orf70Q9BRQ4 267 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 PIMREGQ9BSJ6 248 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF577Q9BSK1 485 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 ZNF416Q9BWM5 594 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 SPATA16Q9BXB7 569 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 TLR10Q9BXR5 811 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 WDR11Q9BZH6 1224 aa2.82□□□□□ -1.96
UBBP3-201ENST00000445497 QRSL1Q9H0R6 528 aaKnown RBP2.82□□□□□ -1.96
UBBP3-201ENST00000445497 DNTTIP1Q9H147 329 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms