RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 PTAR1Q7Z6K3 402 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 CENPLQ8N0S6 344 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 HDAC10Q969S8 669 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 CINPQ9BW66 212 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 AGO1Q9UL18 857 aaKnown RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 APOBEC2Q9Y235 224 aaKnown RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 ACTL7AQ9Y615 435 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 OBSL1O75147 1896 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 A0A1B0GVM2 712 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 ILVBLA1L0T0 632 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 TCAF2A6NFQ2 919 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 SLC7A4O43246 635 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 KDELR3O43731 214 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 SERPINA6P08185 405 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 LAG3P18627 525 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 LEPRP48357 1165 aaKnown RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 PPP3CCP48454 512 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 ALDH18A1P54886 795 aaKnown RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 DEFB103AP81534 67 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 LAMB3Q13751 1172 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 RAB33AQ14088 237 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 LRRC8EQ6NSJ5 796 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 ZYG11AQ6WRX3 759 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 NAPRTQ6XQN6 538 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 CHST9Q7L1S5 443 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 DNAJB7Q7Z6W7 309 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 FSTL5Q8N475 847 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 PSKH2Q96QS6 385 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 MGME1Q9BQP7 344 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
RBM39-216ENST00000444878 KLF16Q9BXK1 252 aaPredicted RBP13.78□□□□□ -0.2
RBM39-216ENST00000444878 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.23e-6■■■■□ 19.7
RBM39-216ENST00000444878 A0A087X1B8 175 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 STK25O00506 426 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 LDB2O43679 373 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 TSPAN3O60637 253 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 KLHL2O95198 593 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 GLDCP23378 1020 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 SGSHP51688 502 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 EPHB3P54753 998 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 GALNT3Q14435 633 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 TSNAXIP1Q2TAA8 658 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 ZNF789Q5FWF6 425 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 LIPMQ5VYY2 423 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 DENND4CQ5VZ89 1909 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 ALG1LQ6GMV1 187 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 SETD3Q86TU7 594 aaPredicted RBP13.77□□□□□ -0.21
RBM39-216ENST00000444878 CILP2Q8IUL8 1156 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 TMEM151AQ8N4L1 468 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 NXNL1Q96CM4 212 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 NDNQ99608 321 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 OMDQ99983 421 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
RBM39-216ENST00000444878 MFSD1Q9H3U5 465 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 CD248Q9HCU0 757 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 XPR1Q9UBH6 696 aa13.77□□□□□ -0.21
RBM39-216ENST00000444878 CAPN14A8MX76 684 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 CCL22O00626 93 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 GYG2O15488 501 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 ENO1P06733 434 aaKnown RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 MBL2P11226 248 aaPredicted RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 ARSDP51689 593 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 CLCN5P51795 746 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 KPNA2P52292 529 aaKnown RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 PRKAA2P54646 552 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 DDX53Q86TM3 631 aaKnown RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 LMNTD2Q8IXW0 634 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 ZNF781Q8N8C0 355 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 STYXQ8WUJ0 223 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 MUC3BQ9H195 1237 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 TLE6Q9H808 572 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.76□□□□□ -0.212e-13■□□□□ 9.7
RBM39-216ENST00000444878 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 KCTD3Q9Y597 815 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 CBX4O00257 560 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 SH3BP5O60239 455 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 NDST3O95803 873 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 SBK3P0C264 359 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 ALOX15P16050 662 aaPredicted RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 SLC8A1P32418 973 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 SCNN1BP51168 640 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 USP4Q13107 963 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 RCN2Q14257 317 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 RFTN1Q14699 578 aaPredicted RBP13.76□□□□□ -0.21
RBM39-216ENST00000444878 TBCCQ15814 346 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 CFAP157Q5JU67 520 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
RBM39-216ENST00000444878 TREML1Q86YW5 311 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms