RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 LRRC73Q5JTD7 316 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 PRAMEF14Q5SWL7 426 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 GCNT7Q6ZNI0 430 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 GLRX5Q86SX6 157 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 RHOT1Q8IXI2 618 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 PQLC3Q8N755 202 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 DENND6BQ8NEG7 585 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 CXorf40AQ8TE69 158 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 ECHDC3Q96DC8 303 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 TSGA13Q96PP4 275 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 RNF157Q96PX1 679 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 NUDCD1Q96RS6 583 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 CDC6Q99741 560 aa18.8■□□□□ 0.6
CCDC188-202ENST00000444532 DDX56Q9NY93 547 aaKnown RBP18.8■□□□□ 0.6
CCDC188-202ENST00000444532 EPN1Q9Y6I3 576 aaPredicted RBP18.8■□□□□ 0.6
CCDC188-202ENST00000444532 NCOR2Q9Y618 2525 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 A0A0A6YYK5 440 aaPredicted RBP18.79■□□□□ 0.6
CCDC188-202ENST00000444532 LRRD1A4D1F6 860 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 FPGTO14772 594 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 MMP20O60882 483 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 TM7SF2O76062 418 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 ITIH2P19823 946 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 CCNCP24863 283 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 MMP13P45452 471 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 CLDN2P57739 230 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 FAM193AP78312 1265 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 IL9RQ01113 521 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 SHBQ15464 509 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 ODF2Q5BJF6 829 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 TIGD7Q6NT04 549 aaPredicted RBP18.79■□□□□ 0.6
CCDC188-202ENST00000444532 ERAP2Q6P179 960 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 PGBD5Q8N414 524 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 TEX26Q8N6G2 289 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 BAHD1Q8TBE0 780 aaPredicted RBP18.79■□□□□ 0.6
CCDC188-202ENST00000444532 SAP25Q8TEE9 199 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 FATE1Q969F0 183 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 BMFQ96LC9 184 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 KLF6Q99612 283 aaPredicted RBP18.79■□□□□ 0.6
CCDC188-202ENST00000444532 MGME1Q9BQP7 344 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 C1QTNF7Q9BXJ2 289 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 PCDH12Q9NPG4 1184 aa18.79■□□□□ 0.6
CCDC188-202ENST00000444532 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 C3orf70A6NLC5 250 aaPredicted RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 TRAFD1O14545 582 aaPredicted RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 RIOK3O14730 519 aaKnown RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 MATN3O15232 486 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 RAD51BO15315 384 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 SPOPO43791 374 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 NDUFA10O95299 355 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 ITGAVP06756 1048 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 CR2P20023 1033 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 MX2P20592 715 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 COMTP21964 271 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 SHC2P98077 582 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 KYAT3Q6YP21 454 aaKnown RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 Q6ZSR6 202 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 OR13H1Q8NG92 308 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 SPOCK2Q92563 424 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 CENPTQ96BT3 561 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 IFT43Q96FT9 208 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 CALR3Q96L12 384 aaKnown RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 MAK16Q9BXY0 300 aaKnown RBP18.78■□□□□ 0.6
CCDC188-202ENST00000444532 SCUBE2Q9NQ36 999 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 HAUS2Q9NVX0 235 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 IMPACTQ9P2X3 320 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 AMACRQ9UHK6 382 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 BTBD3Q9Y2F9 522 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 ATP8A1Q9Y2Q0 1164 aa18.78■□□□□ 0.6
CCDC188-202ENST00000444532 CFAP69A5D8W1 941 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 POM121BA6NF01 834 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 SOWAHDA6NJG2 315 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 SOCS5O75159 536 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 TRIM16O95361 564 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 EPHA8P29322 1005 aaPredicted RBP18.77■□□□□ 0.6
CCDC188-202ENST00000444532 CDC25BP30305 580 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 RABIFP47224 123 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 PTAR1Q7Z6K3 402 aaPredicted RBP18.77■□□□□ 0.6
CCDC188-202ENST00000444532 ZSWIM9Q86XI8 627 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 PAF1Q8N7H5 531 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 MAML1Q92585 1016 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 NSMCE3Q96MG7 304 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.6
CCDC188-202ENST00000444532 WRAP53Q9BUR4 548 aaKnown RBP18.77■□□□□ 0.6
CCDC188-202ENST00000444532 NOD2Q9HC29 1040 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 GPR27Q9NS67 375 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 DTLQ9NZJ0 730 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 ANGPTL2Q9UKU9 493 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 ALG6Q9Y672 507 aa18.77■□□□□ 0.6
CCDC188-202ENST00000444532 LRRK1Q38SD2 2015 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 TOR1BO14657 336 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 HTRA2O43464 458 aaPredicted RBP18.76■□□□□ 0.59
CCDC188-202ENST00000444532 KRT1P04264 644 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 ZFXP17010 805 aaPredicted RBP18.76■□□□□ 0.59
CCDC188-202ENST00000444532 CES1P23141 567 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 MMP12P39900 470 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 GBE1Q04446 702 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 SLC10A2Q12908 348 aaPredicted RBP18.76■□□□□ 0.59
CCDC188-202ENST00000444532 BNIP3Q12983 259 aa18.76■□□□□ 0.59
CCDC188-202ENST00000444532 AGERQ15109 404 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms