RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 TRIM13O60858 407 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 DDHD2O94830 711 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 LRIG2O94898 1065 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 CHRNA1P02708 482 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 TSHRP16473 764 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 SLC11A1P49279 550 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 PHEXP78562 749 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 DPYSL2Q16555 572 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 GRTP1Q5TC63 336 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 PDPK2PQ6A1A2 396 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 CLEC20AQ6ZU45 233 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 C10orf107Q8IVU9 208 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 PIWIL2Q8TC59 973 aaKnown RBP10.68□□□□□ -0.7
TOP3B-210ENST00000444502 TMEM174Q8WUU8 243 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 TSPAN17Q96FV3 270 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 QKIQ96PU8 341 aaKnown RBP eCLIP10.68□□□□□ -0.75e-7■■■■□ 21.7
TOP3B-210ENST00000444502 CPNE1Q99829 537 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 POLR1EQ9GZS1 481 aaKnown RBP10.68□□□□□ -0.7
TOP3B-210ENST00000444502 CLPBQ9H078 707 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 NMRAL1Q9HBL8 299 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 BPIFA1Q9NP55 256 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 PNPOQ9NVS9 261 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 ZNF358Q9NW07 568 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 EPS15L1Q9UBC2 864 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 RNASEH1O60930 286 aaKnown RBP10.68□□□□□ -0.7
TOP3B-210ENST00000444502 GRK2P25098 689 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 HMOX2P30519 316 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 RGS4P49798 205 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 CYP4F8P98187 520 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 SLC25A3Q00325 362 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 BCL2L1Q07817 233 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 ZNF284Q2VY69 593 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
TOP3B-210ENST00000444502 SERPINA13PQ6UXR4 307 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 GIPC3Q8TF64 312 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 NUF2Q9BZD4 464 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 TRHDEQ9UKU6 1024 aa10.68□□□□□ -0.7
TOP3B-210ENST00000444502 SBF2Q86WG5 1849 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 BEST1O76090 585 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 GLP2RO95838 553 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 C1RP00736 705 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 POLR2EP19388 210 aaKnown RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 DAOAP59103 153 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CNGA3Q16281 694 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 TMEM259Q4ZIN3 620 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 OR52E8Q6IFG1 317 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 GLT6D1Q7Z4J2 308 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CRYBG2Q8N1P7 616 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 IL1RL2Q9HB29 575 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 GPAMQ9HCL2 828 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CASS4Q9NQ75 786 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 SNX15Q9NRS6 342 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 HEATR9A2RTY3 570 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 GCATO75600 419 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CRTAMO95727 393 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 MT-CYBP00156 380 aaPredicted RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CTPS1P17812 591 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 NME5P56597 212 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 KCNJ11Q14654 390 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CBX2Q14781 532 aaPredicted RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 NCBP2-AS2Q69YL0 99 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 KYAT3Q6YP21 454 aaKnown RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 FOPNLQ96NB1 174 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CENPOQ9BU64 300 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CCDC134Q9H6E4 229 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CACYBPQ9HB71 228 aaKnown RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 SAR1AQ9NR31 198 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 FZD10Q9ULW2 581 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 FAM50BQ9Y247 325 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 TEX264Q9Y6I9 313 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 EFCAB14O75071 495 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 ASLP04424 464 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 BPGMP07738 259 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 ITGALP20701 1170 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 NPY2RP49146 381 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 BOP1Q14137 746 aaKnown RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 DLG2Q15700 870 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 C6orf10Q5SRN2 563 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 B3GNT6Q6ZMB0 384 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 TMPRSS6Q8IU80 811 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 SLC41A1Q8IVJ1 513 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CHPFQ8IZ52 775 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 KREMEN2Q8NCW0 462 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 PPP1R2P1Q96PQ5 205 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 TBL1YQ9BQ87 522 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 MRPL1Q9BYD6 325 aaKnown RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 USP29Q9HBJ7 922 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 PCDH10Q9P2E7 1040 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 GNEQ9Y223 722 aaKnown RBP10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CDYLQ9Y232 598 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 CPQQ9Y646 472 aa10.67□□□□□ -0.7
TOP3B-210ENST00000444502 SYNDIG1LA6NDD5 238 aa10.66□□□□□ -0.7
TOP3B-210ENST00000444502 PRR5-ARHGAP8B1AHC4 643 aa10.66□□□□□ -0.7
TOP3B-210ENST00000444502 PARNO95453 639 aaKnown RBP10.66□□□□□ -0.7
TOP3B-210ENST00000444502 PROCP04070 461 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms