RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 SPATA21Q7Z572 469 aa4□□□□□ -1.77
UBR3-206ENST00000444475 ZNF573Q86YE8 665 aa4□□□□□ -1.77
UBR3-206ENST00000444475 CCDC28AQ8IWP9 274 aa4□□□□□ -1.77
UBR3-206ENST00000444475 MMP21Q8N119 569 aa4□□□□□ -1.77
UBR3-206ENST00000444475 CRYBG2Q8N1P7 616 aa4□□□□□ -1.77
UBR3-206ENST00000444475 TMEM116Q8NCL8 245 aa4□□□□□ -1.77
UBR3-206ENST00000444475 BBS1Q8NFJ9 593 aa4□□□□□ -1.77
UBR3-206ENST00000444475 RAB3IL1Q8TBN0 382 aa4□□□□□ -1.77
UBR3-206ENST00000444475 FAM149B1Q96BN6 582 aa4□□□□□ -1.77
UBR3-206ENST00000444475 GRAMD1AQ96CP6 724 aa4□□□□□ -1.77
UBR3-206ENST00000444475 OSBPL8Q9BZF1 889 aa4□□□□□ -1.77
UBR3-206ENST00000444475 TMEM117Q9H0C3 514 aa4□□□□□ -1.77
UBR3-206ENST00000444475 PCIF1Q9H4Z3 704 aa4□□□□□ -1.77
UBR3-206ENST00000444475 SLC32A1Q9H598 525 aa4□□□□□ -1.77
UBR3-206ENST00000444475 PKD2L1Q9P0L9 805 aa4□□□□□ -1.77
UBR3-206ENST00000444475 PCDHA13Q9Y5I0 950 aa4□□□□□ -1.77
UBR3-206ENST00000444475 SH3TC1Q8TE82 1336 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MEX3AA1L020 520 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 TAF5LO75529 589 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 RPS6KA4O75676 772 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SEC14L2O76054 403 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ERLIN2O94905 339 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 RARAP10276 462 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SAT1P21673 171 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MCM3P25205 808 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SHMT1P34896 483 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 GPR19Q15760 415 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 DOK7Q18PE1 504 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 HSDL1Q3SXM5 330 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CERKLQ49MI3 558 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 FASTKD1Q53R41 847 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 FIGNQ5HY92 759 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MBLAC2Q68D91 279 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 LRRC6Q86X45 466 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TMEM176AQ96HP8 235 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PGAM5Q96HS1 289 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 FCRL2Q96LA5 508 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 GDAP1L1Q96MZ0 367 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ANKRD27Q96NW4 1050 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ACBD6Q9BR61 282 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MKRN2Q9H000 416 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 KLC2Q9H0B6 622 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ARHGEF3Q9NR81 526 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TLR8Q9NR97 1041 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 PRMT7Q9NVM4 692 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 DNAJC17Q9NVM6 304 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 WWOXQ9NZC7 414 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 KCND2Q9NZV8 630 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 WASF3Q9UPY6 502 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CNTN6Q9UQ52 1028 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TDRKHQ9Y2W6 561 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 STRAPQ9Y3F4 350 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 PLEKHM1Q9Y4G2 1056 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CDY2AQ9Y6F7 541 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ABCC2Q92887 1545 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 NCAPD2Q15021 1401 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ZBTB42B2RXF5 422 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 NDUFAB1O14561 156 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SIAH2O43255 324 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 EFSO43281 561 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PPP6R2O75170 966 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 KRT36O76013 467 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PENKP01210 267 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 AREGP15514 252 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TATP17735 454 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 VCLP18206 1134 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 IL1R2P27930 398 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CLCN5P51795 746 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 PPARAQ07869 468 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TARDBPQ13148 414 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR3-206ENST00000444475 SNTB2Q13425 540 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 PPIGQ13427 754 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR3-206ENST00000444475 SCARF1Q14162 830 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 LPIN1Q14693 890 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 LARS2Q15031 903 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 NONOQ15233 471 aaKnown RBP eCLIP3.99□□□□□ -1.77
UBR3-206ENST00000444475 ZXDCQ2QGD7 858 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 KLHL40Q2TBA0 621 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 BTBD16Q32M84 506 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TMEM119Q4V9L6 283 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 KHDC1LQ5JSQ8 128 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 SCARA5Q6ZMJ2 495 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CAMK1DQ8IU85 385 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CYP4X1Q8N118 509 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TC2NQ8N9U0 490 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ST7LQ8TDW4 575 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 ZNF483Q8TF39 744 aaPredicted RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 CYB5D2Q8WUJ1 264 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 RAPGEF4Q8WZA2 1011 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 RHBDF1Q96CC6 855 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MAP6Q96JE9 813 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 HAUS8Q9BT25 410 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 BDH2Q9BUT1 245 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CPEB1Q9BZB8 566 aaKnown RBP3.99□□□□□ -1.77
UBR3-206ENST00000444475 CDT1Q9H211 546 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 CYP3A43Q9HB55 503 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 TREM1Q9NP99 234 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 FSCN3Q9NQT6 498 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 MTMR10Q9NXD2 777 aa3.99□□□□□ -1.77
UBR3-206ENST00000444475 DNAJB11Q9UBS4 358 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms