RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SKA1Q96BD8 255 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 LGMNQ99538 433 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 IL12RB2Q99665 862 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 OSBPL8Q9BZF1 889 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 RBM22Q9NW64 420 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■□□□□ 9.8
CSNK1E-210ENST00000442216 ATP8A1Q9Y2Q0 1164 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 A0A1W2PQU0 124 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 UPK3BL1B0FP48 263 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 HACD1B0YJ81 288 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 UPK3BL2E5RIL1 263 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 PRAMEF26H0Y7S4 382 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 DDX3YO15523 660 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 MTSS1O43312 755 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 ENGP17813 658 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 XPAP23025 273 aaPredicted RBP15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 NFKBIAP25963 317 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 MAXP61244 160 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 ADCY2Q08462 1091 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 AP1B1Q10567 949 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 XRCC4Q13426 336 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 GSE1Q14687 1217 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 PRKD1Q15139 912 aaPredicted RBP15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 ZNF284Q2VY69 593 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 TMEM52BQ4KMG9 183 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 SLC45A4Q5BKX6 768 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 IL27RAQ6UWB1 636 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 FAM174AQ8TBP5 190 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 TFB1MQ8WVM0 346 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 EDEM2Q9BV94 578 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 NOD2Q9HC29 1040 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 ZFR2Q9UPR6 939 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 PPP2R2CQ9Y2T4 447 aa15.17■□□□□ 0.02
CSNK1E-210ENST00000442216 CFAP69A5D8W1 941 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 NEMP1O14524 444 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 VILLO15195 856 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 SPINT1O43278 529 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 MAGEC1O60732 1142 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 TJP3O95049 919 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 FTCDO95954 541 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 PYGMP11217 842 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 PECAM1P16284 738 aaPredicted RBP15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 CD38P28907 300 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 MAT2AP31153 395 aaKnown RBP15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 ITKQ08881 620 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 OVGP1Q12889 678 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 ERAP2Q6P179 960 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 IQCHQ86VS3 1027 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 TRIM58Q8NG06 486 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 NSMCE3Q96MG7 304 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 LENG8Q96PV6 779 aaPredicted RBP15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 SEMA3CQ99985 751 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 C1QTNF2Q9BXJ5 285 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 SLC17A9Q9BYT1 436 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 TMEM9BQ9NQ34 198 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 LZTFL1Q9NQ48 299 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 RXFP3Q9NSD7 469 aa15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 PACSIN2Q9UNF0 486 aaPredicted RBP15.16■□□□□ 0.02
CSNK1E-210ENST00000442216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 KCNK1O00180 336 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 CDX4O14627 284 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 RIOK3O14730 519 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 GDF9O60383 454 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 GJB3O75712 270 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 ZNF189O75820 626 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 JCHAINP01591 159 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 HLA-DQB2P05538 268 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 PTMAP06454 111 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 HNRNPA2B1P22626 353 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 CA4P22748 312 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 CSNK1EP49674 416 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 ATXN3P54252 364 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 GRIK2Q13002 908 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 STAT4Q14765 748 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 NOMO1Q15155 1222 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 LLGL1Q15334 1064 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 TEX44Q53QW1 395 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 SEL1L3Q68CR1 1132 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 ADAT2Q7Z6V5 191 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 ZSWIM9Q86XI8 627 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 MFSD2AQ8NA29 543 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 TMEM145Q8NBT3 493 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 DENND6BQ8NEG7 585 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 CXorf40AQ8TE69 158 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 SLC6A18Q96N87 628 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 VAT1Q99536 393 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 HEMGNQ9BXL5 484 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 PCDH12Q9NPG4 1184 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 AASDHPPTQ9NRN7 309 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 SAE1Q9UBE0 346 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 CDV3Q9UKY7 258 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 PHTF1Q9UMS5 762 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 PPIL1Q9Y3C6 166 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 PCDHGC4Q9Y5F7 938 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 HS3ST3A1Q9Y663 406 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 SLCO1B1Q9Y6L6 691 aa15.15■□□□□ 0.02
CSNK1E-210ENST00000442216 FRYLO94915 3013 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms